Hymenobacter nivis: DDQ68_21695
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Entry
DDQ68_21695 CDS
T05498
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
hnv
Hymenobacter nivis
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hnv02000
]
DDQ68_21695
Transporters [BR:
hnv02000
]
Other transporters
Pores ion channels [TC:
1
]
DDQ68_21695
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
MetallophosN
Motif
Other DBs
NCBI-ProteinID:
AWM35148
UniProt:
A0A2Z3GPD0
LinkDB
All DBs
Position
4901326..4904334
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AA seq
1002 aa
AA seq
DB search
MANQYSLTRAVKTLGRCWPSIFLLVLCLGAPALAWAQQTVKGTVTDEKNAALPGVTVRIK
DGTAAVASNPNGTYSIQTSGPADILVFSFVGTVTKEIAPGTQTSLNVTLLPDAQKLNDVV
VIGYGTASRADITGAVTSIKSEEFNQGVLTTPAELLQGKVAGLNITKSGDPNQRPSVVLR
GPSTIRTVNGGVTEPFYVIDGVPGASIDLLAPDDIATIDVLKDASSTAIYGTRAANGVII
ITTKRAKPGQSRLTYSAYGAVANVSKKIDMLSGDELRQYLVDNKTKPLATPADDDGSNTN
WQDLIERTSYSTNHNLSFTGSANATDYGASVNYLKNNGTLINTSLERLIYRGFINQRFFN
NRLKLGVNIINSSTTQNDIPQSSTLPGMLFYLPTVSPFNANGTYKENYTRTGSGPLNPLS
LANNNAYVTKDNKTLVNGLVQVDVLTGLKVTLSASTQRAQTNYSSYLNSQSGLAVNLGGV
ARRAEYENTNDVLEAYANYDKTLGLHSFQLLGGYSYQQDRTNDGFGITTQNFANNALGSN
NLYLSNPSSLAQIAFDNNPISTLRLESQYARVQYQYADRYLAQVSLRRDGSSVFGVNNRY
GYFPTAALGWRLINEEFMRGLPVFSDLKLRAGYGVSGNSQGFDAFSAILIYGTPPGSSKY
LNNGAISNVVNAVRNENPNLKWESTATTNIGLDFGLFKNRLTGSVDYYIKKTSDLIDDVL
PVSSTEFQYTTYTANVGRMTNRGIEVALSVVPVQTATFTWRSSLNFSHNYNNIDNLSTDR
FTIPYIQTAQLGGKGQSGNYSQIVQPGSPLGTFKLWHYLGKNDLGVSTYQKADGSVTATQ
PLTTDMQVAGSAQPSLIYGWSNTFTCKGFDLNFLVRGVMGNKILNATLAGLNNPADARLQ
NIPRFTLGEAFTDINAYLISDRFLESGAYLRLDNATLGYTLRPHTQYVQALRLYVATNNL
FIITKYRGIDPEINIGGLTPGIDNQNFYPKTRTFTLGLSASF
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcagtactctttaacacgcgctgtaaaaacgttgggtcggtgctggcccagt
atcttcttgctggtcttgtgccttggcgccccggccctggcctgggctcagcaaaccgtg
aagggcaccgtgaccgacgaaaagaacgccgcgctgcccggcgtcacggttcgcataaaa
gacggtactgcggcggtggccagtaaccccaacggtacctacagcatccagaccagcgga
ccggccgatattctagtgttctcgtttgtgggcacggtgacgaaggaaatagcacccggc
acccaaaccagccttaacgtgacgctgctgcccgatgcgcagaagctgaacgacgtggtg
gttatcggctacggtacggccagccgcgcggatattacgggcgccgttacgtccattaaa
tctgaggaatttaaccagggcgtgctcacgacgcccgccgagctgctgcaaggcaaggtg
gccggcctgaacatcaccaagagcggcgaccccaaccagcggccgtcggtggtgctgcgg
gggccctccaccatccgcaccgtaaacgggggcgtgaccgagcctttttacgtcatcgac
ggggtgccgggcgcgagcatcgacctgttggcccccgacgacattgctaccatcgacgtg
ctgaaggatgcctcctccaccgctatttatggcacgcgggcggccaacggggtcatcatc
attaccaccaagcgggccaagcctggccagtcgcgcctgacctacagcgcctacggggca
gtagccaatgtatcgaagaaaatcgacatgctcagcggcgacgagctgcgccagtacttg
gtcgacaataaaactaaaccgctggccacgcccgctgacgacgacggctcgaataccaac
tggcaggacctaattgagcgcaccagctactcgaccaaccacaacctctcgttcacgggc
tcggccaacgccacggactacggagccagcgtgaactacctaaaaaacaacggtacgctg
atcaatacttcgctggagcgcctcatctaccgagggttcatcaaccagcgctttttcaac
aaccgcctcaagctgggcgtgaacatcatcaacagcagcaccacccaaaacgacattccg
cagagcagcacgctgccgggcatgctgttttacctgcccacagtgagtcccttcaacgcc
aacggcacctacaaggaaaactacacccgcacgggcagcggcccgctcaacccactctca
ctggccaacaacaacgcctacgtcaccaaagacaacaaaacgctggtcaacggcctggtg
caggtagacgtgctaaccggtctgaaagtgacgctcagtgcctcgacccagcgcgcccag
accaactacagcagctatctcaacagccagtcgggcctggccgtgaacctgggcggggtg
gcccgccgcgccgagtacgagaacaccaacgacgtactggaggcctacgccaactacgac
aaaacgctcgggctgcatagcttccagctactgggcggctactcgtatcagcaggaccgc
acgaacgacggtttcggcatcacgacccagaactttgccaataatgcactgggatccaat
aacctgtacttatctaacccgtcgtcgctggcccagattgccttcgataacaacccgatt
tctaccctgcggctcgaatcgcagtacgcccgcgtgcagtaccagtacgccgaccgctac
ctagcgcaagtgtcgctgcgacgcgacggctcgtcggtgttcggcgtgaacaatcgctac
ggctacttcccgacggcggccctgggctggcgcctcatcaacgaggagtttatgcggggc
ctgcccgtgttttcggacctcaagctgcgggccggctacggcgtgtcgggcaacagccag
ggcttcgacgccttctcggccatcctgatttacggcacgccgcccggcagcagcaagtat
ttgaacaacggcgcgatatcgaacgtggtgaacgcagtgcgcaacgaaaatcccaacctg
aagtgggaaagcaccgccactaccaacattggcctggactttggcctgttcaagaaccgc
ctgacgggttcagtggattactacatcaagaaaaccagcgatttgattgacgacgtgctg
ccggtgtcgagcaccgagttccagtacacgacctacaccgccaacgtgggccgcatgacc
aaccgcggcatcgaggtggccctgagcgtggtgccagtgcaaacggcgacctttacctgg
cgctcgtcgctgaacttctcgcataactacaacaacatcgacaacctgtcgaccgaccgc
ttcacgattccctacattcagacggcgcagctcgggggcaagggccagagcggcaactac
agccagattgtgcagcccggctcaccactgggcacctttaagctgtggcactacctgggc
aaaaacgacttgggcgtaagcacctaccaaaaagccgacggcagcgtgacggccacccag
cccctcaccaccgacatgcaggtggcgggtagcgcccagccttcgctcatctacggctgg
tccaacacctttacctgcaagggcttcgacctgaactttctggtgcgtggcgtgatgggc
aacaagattctgaacgccaccctggccggcctcaacaacccggccgatgcacgcctgcag
aacattccgcgcttcacgctgggcgaggcctttaccgacatcaacgcctacctcatctcc
gaccgcttcctggaaagtggcgcgtacctgcgcctcgacaacgctacgctgggctacacc
ctgcggccccatacgcaatacgtgcaagcgctgcgcctttacgtggcaaccaacaacttg
ttcatcatcaccaagtaccggggcatcgaccccgaaatcaacattggggggcttacgccg
ggcatcgacaaccagaacttctaccccaagacccggacgttcaccctgggcctgtcggct
tccttctaa
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