Hymenobacter nivis: DDQ68_21820
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Entry
DDQ68_21820 CDS
T05498
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
hnv
Hymenobacter nivis
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hnv02000
]
DDQ68_21820
Transporters [BR:
hnv02000
]
Other transporters
Pores ion channels [TC:
1
]
DDQ68_21820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
CarbopepD_reg_2
CarboxypepD_reg
CooC_C
Motif
Other DBs
NCBI-ProteinID:
AWM35170
UniProt:
A0A2Z3H2C8
LinkDB
All DBs
Position
complement(4929628..4932924)
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AA seq
1098 aa
AA seq
DB search
MLKHLSTLKQSFVSEKNRLLTFIFLIAFSFPAVSSFRSSFFFTLIPFSMQTFLLNSNWCR
ASLLAVGASVAVPAARAAAHGAPIFRYVDSTVKGQITDDKGSPLPGATVVVKGSVGVGVS
ADADGRFTLTLPTGNETLVISSVGYVAQEIALGGRTTLSVKLVTDNKALDEVVVVGYGTQ
KRSDLTGAVGSVTAKELTERPVINVGQGLQGRVAGVSVALNSGQPGAGNPVIRIRGYGSI
NAGNNPLIVVDGVFWTSGINSINPNDIANIEVLKDASATAIYGSQGSNGVIIITTKRGKE
GSQVSYDAFVSVSHIARKLSVLDAKGFLATEDLGYQNVQKFDPAGWAAGKYVNKNPMIKR
RALANPNDPHRLFDENLNPLYDTDWQDATTQTGVTQNHNLSFSGGNDKLTYGLYLNYANA
QGTIINTYQKRYNARLVIDNQVQKWLKVGATINYSNINESIGNDFTGGNNIPRMMIEMPS
IFPTKYLDGTYAKRQDYPDMESGDNPVAIAQQDQELRSRQIFSGNGYASFTILPSLNFRS
VLGTTIESRNDPSFASTLIQLRGQQGYASLNTFNSTALQWQNYLTFNKQISENGTLNVVA
GVDARRFNSLSNGASTTLLVDNAYNYYNLGVGSTPNPPSSDYQADQFFSLFARANYNYKN
RYLLTGTIRRDGSSRFGADNKSAVFPSAAVAWRISEEDFLKDNSIISDLKLRFGYGRTGN
SGPDFGNYVSQSFLGTSSYVFNGNRTNGIAINSLGNPTLKWETADQFDLGLNVGLLQNRI
TLEADIYQRTTNNLLLNAPVPRSSGYGSIPSNIGSVRNRGLELALNTVNVQTTDFTWNTT
FNISFLQNRILALGAANDDIFPGPNFLNQTNVLRVGQPVGSFFGLERLGTWSTAEADQAL
KYNRLPGDLKFKDQNGDGQINDQDRVLLGKNIPTGFGTFINNFRYKNFDLLVDLQFTYGN
SVMNLTEHSAQDRTGQANSYTRALTDAWTPDNQNTSIAQVRPSYLSYDTRIDSYKVENGS
FIRGRNASFGYNFNNALTKRAGLTRLRVYVAAQNYFLITKYFGYDPETSTFNNAFSQGIQ
FFDYPKARSFTAGLNVSF
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacatttaagcaccctaaaacaatcgtttgtttctgaaaaaaatcgattgctc
acttttatttttctcatcgccttctcgtttccggccgtctcatccttccggtcgtctttt
ttcttcaccctcatccctttttccatgcaaacttttttattaaacagtaactggtgccgg
gcatcgctgctcgcggtaggagcatcggtggcagtgcctgccgcgcgggccgcagcgcat
ggggcccccatcttccgctacgtcgactcgacggtgaaagggcagataacagacgacaag
ggcagcccactgccgggggctacagtggtggtaaaagggtcggtgggcgtgggcgtcagc
gccgatgccgacggccggtttacgctgaccctgcccacgggcaacgaaacgctggtgatt
tcttcggtgggctacgtagcccaggaaattgccctcggcggccgcactaccttatcggtg
aagctggtaacggataacaaggccctggacgaggtagtggtggtgggctacggcacccag
aagcgctcggacctgaccggcgccgtgggcagtgtaacggccaaagagctgaccgagcgc
ccggtgatcaacgtcgggcagggtttgcaaggccgggtagcgggcgtgagtgtggcactg
aactcaggccagcccggcgccggtaacccagtgattcgcatccggggctacggctccatc
aacgcgggtaacaacccgctcatcgtagttgacggcgtattttggacttcgggcatcaac
agcatcaaccccaatgacattgccaacatcgaggtgcttaaagacgcttcggccacggcc
atttacggctcgcagggcagcaacggggtaattatcatcacgaccaagcgcggcaaagaa
ggctcgcaggtgagctacgacgccttcgtgagcgtcagccacattgcccgcaagctgtcg
gtgctcgatgccaagggattcctggccactgaggacctgggctaccagaacgtgcagaaa
tttgaccctgctggctgggccgctggtaagtacgtcaacaagaaccctatgattaagcgg
cgggcgctggctaaccccaacgacccgcaccgcttgttcgacgagaacctgaacccgctt
tacgacaccgactggcaggatgcaaccacccaaaccggggtgacgcagaaccacaacctg
tcgttttcgggtggcaacgacaagcttacctacggcctgtacctgaactacgccaacgcg
cagggcaccattatcaacacttaccagaagcgctacaacgcccgcctggtaattgataac
caagtacagaagtggttaaaggtgggagctacgatcaactattccaacatcaacgagagc
atcggcaacgactttacggggggcaacaacatcccgcgcatgatgattgagatgccttcc
atctttcccaccaagtacctggacggcacttacgccaagcgccaggactaccccgacatg
gagagcggcgacaacccggtggcgattgcccagcaggaccaggagctgcgcagccgccag
atattctcgggcaatggctatgctagctttaccattctgccgagcctgaatttccgcagc
gtactggggacgaccattgaatcgcgcaatgacccatcgtttgccagcaccttgatccag
ttgcgcgggcagcagggctacgccagcctcaacacgttcaactccacggcgctacaatgg
cagaactatttgacgttcaacaagcagatcagcgagaacggtacgttgaacgtggtggcc
ggcgtggacgcgcggcgcttcaatagcctctcgaacggggccagcacgacgctgctcgtg
gacaacgcttacaattactacaacctgggcgtaggctcgacgcccaacccgcccagctct
gattaccaggccgaccaatttttctccctcttcgcccgggccaactacaactacaaaaac
cgctacctgctgaccggtactatccgccgcgacggctcgtcgcgctttggggccgataac
aagagcgccgtgtttccgtcggcagccgtggcttggcgcatctcggaggaagatttcctc
aaggataattcgattatctcggacctgaaactgcgcttcggctacggccgcaccggtaac
agtggccctgacttcggcaactacgtgtcgcagagctttttgggcaccagcagctacgtg
ttcaacggcaatcgtaccaacggcattgccattaactcactgggcaacccgaccttgaag
tgggaaacggcggaccagtttgatctgggcctgaacgtgggcctgctgcaaaatcgcatc
accttggaggccgacatctaccagcgcactaccaacaatttgctgctcaacgccccggtg
ccgcgcagcagcggctacggcagcatcccgagcaacatcggcagcgtgcgcaaccgtggc
ctggaactggccctgaacacggtgaacgtgcagaccacggactttacctggaacacgaca
ttcaacatctcctttttgcaaaaccgcatcctggccctgggcgcggccaatgacgatatc
tttcccggcccaaacttcctgaaccagaccaacgtgctgcgcgtgggccagccggtgggc
tcgttcttcggcttggagcgcctgggcacctggagcactgcggaggctgaccaagccctc
aagtataaccgcctgcctggcgacctcaagttcaaggaccagaacggcgatgggcaaatc
aacgaccaggaccgggtgctgctgggcaagaacattccgaccggcttcggtacgttcatc
aacaacttccgctacaagaacttcgatttgctggtggatttgcagttcacctacggcaac
agcgtgatgaacctgaccgagcactcggctcaggaccgcaccggccaggccaacagctac
acccgcgccctgaccgatgcctggactcctgacaaccagaacacgagcattgcccaggtg
cggccgtcctatctctcctacgacacccggattgactcctacaaggtggagaacggctcc
ttcatccgggggcgcaacgcctcgttcggctacaacttcaacaacgccctgaccaagcgc
gccggcctgacccgcttgcgggtgtacgtagcggcccaaaactacttcctcatcacgaag
tacttcggctacgaccccgaaacgtccaccttcaacaatgccttttcgcaagggattcag
ttcttcgactaccccaaggcgcgcagctttacggccggcctgaatgtgtctttttaa
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integrated database retrieval system
