Halobacillus naozhouensis: P9989_02255
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Entry
P9989_02255 CDS
T09043
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hnz
Halobacillus naozhouensis
Pathway
hnz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P9989_02255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hnz03019
]
P9989_02255
03009 Ribosome biogenesis [BR:
hnz03009
]
P9989_02255
Enzymes [BR:
hnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
P9989_02255
Messenger RNA biogenesis [BR:
hnz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P9989_02255
Ribosome biogenesis [BR:
hnz03009
]
Prokaryotic type
rRNA helicases
P9989_02255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
SUa-2TM
Motif
Other DBs
NCBI-ProteinID:
WFT75256
LinkDB
All DBs
Position
409572..411050
Genome browser
AA seq
492 aa
AA seq
DB search
MTTFNSLGLSNPVLKALNNMGFEETTPIQEQTIPLGLQGKDVIGQAQTGTGKTAAFGIPM
IEKINKDIKSVQGLVIAPTRELAIQVAEEVNRLGKYKGVRTLPIYGGSNMERQIRALRDN
QIVVATPGRLLDHIRRKTIKLENVHTAVLDEADEMLNMGFIDDIRDILKSLPEHRQTLLF
SATMPKEIRNIATTLMKKPEEVKVKSKEMTVENIDQYYLEIPEKHKFDTLTRLLDIHAPA
LAIVFGRTKRRVDEVSDGLQARGFRAEGIHGDLTQGKRMSVLNKFKKGRIEILVATDVAA
RGLDISEVSHVYNFDIPQDPESYVHRIGRTGRAGRKGESVSFVTSREKAQLNLIEKLTKK
KVERMNVPSSDEARRGQQQVAVEKLTGAVGNKDLDKYRQSASELLEQHDASDLVAAALKM
LTKERSEVPVRLSSVQPISVKGARGGGKGKGGNKPYRKDGKRNFKKHSNKSRNFKGKGNR
GFQNKGRNSNAK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
gtgacaacattcaattcattaggattatccaatccggtgttgaaggctttaaacaacatg
gggtttgaagaaacgacacctattcaagagcaaaccattcctcttgggttacaggggaaa
gatgtcatcggccaagcgcaaacgggaacaggtaaaacagctgcattcggaataccgatg
atcgagaaaataaacaaagatatcaagtctgttcaggggctggtgatcgcgccgacgcgt
gaattagccattcaagtagctgaagaagtaaaccggcttggtaaatataaaggggtacgc
acacttccgatttatggtgggtcgaatatggaacgccaaattcgtgcacttcgagacaac
caaatcgttgtggcaactcctggtcgtttacttgatcacatccgtcgtaaaacgattaaa
cttgagaacgttcatacagctgtgttagatgaagcagacgaaatgttaaacatgggtttc
attgatgacattcgtgacatccttaagtctcttccagagcaccgtcagacgttgcttttc
tcagctaccatgcctaaggaaatccgcaacatcgccacaacgctcatgaagaaacctgag
gaagttaaagtgaaatcaaaggaaatgacagtcgaaaatatcgatcaatactacttggag
atcccggaaaagcataagttcgacacgttaacacgccttctggatattcacgctccagca
ttagcgatcgtgtttggccgtacgaaacgacgtgtagatgaagtttcagatggcttacaa
gctcgtggtttccgtgctgaaggtattcacggtgacctcactcagggcaaacgcatgtcc
gtattgaataaattcaaaaaaggcagaatcgagatccttgtagcaacagatgttgctgct
cgcggacttgatatttctgaagtatcacatgtttacaattttgacattcctcaggatcct
gaaagctatgtccaccgtattggacgtactggccgtgcaggccgcaaaggggagtctgtt
tcttttgtaacatcacgtgagaaagcacaactcaacttaattgagaagcttacgaagaag
aaggttgagcgcatgaatgtaccttcttctgatgaagcacgtcgtggacaacagcaagtt
gctgtagaaaaactgactggtgctgtaggtaataaagacctcgataagtatagacaatca
gcaagtgaattgcttgagcaacacgatgcgtctgaccttgtggcggcagctttaaaaatg
ctcacaaaagagcgcagtgaggtgccggttcgtttgtcctctgtccagcctatcagtgta
aaaggggcacgcggcggtggaaaaggaaaaggcggtaataagccttaccgtaaagacggc
aagcgcaatttcaaaaagcacagtaataagtcccgtaactttaaaggaaaagggaaccgc
ggtttccaaaataaagggcgtaactcgaacgctaaataa
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