Halobacillus naozhouensis: P9989_03060
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Entry
P9989_03060 CDS
T09043
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hnz
Halobacillus naozhouensis
Pathway
hnz03420
Nucleotide excision repair
hnz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hnz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P9989_03060 (pcrA)
03430 Mismatch repair
P9989_03060 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hnz03400
]
P9989_03060 (pcrA)
Enzymes [BR:
hnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P9989_03060 (pcrA)
DNA repair and recombination proteins [BR:
hnz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P9989_03060 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
P9989_03060 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_30
AAA_22
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
WFT75392
LinkDB
All DBs
Position
565478..567712
Genome browser
AA seq
744 aa
AA seq
DB search
MTQAMNPLLKGLNEQQRNAVTHTEGPLLIMAGAGSGKTRVLTHRIAYLLGEKEVAPRNVL
AITFTNKAAREMKERVEELVGPEGEKIWMSTFHSMCVRILRRDIDRIGYDRNFSILDSSD
QLSVIKQVLKELNLDPKKWVPRAMLGAISNAKNELLTPEEYTRDAASIHEEKIAEVYKGY
QKKLRKNQSLDFDDLIMQTLNLFDRLPEVLEYYQRRFQYIHVDEYQDTNHAQYQLVTQLS
SRYQNLCVVGDSDQSIYRWRGADIKNILSFEKDYPSAQTIMLEQNYRSTELILNAANNVI
GNNSGRKAKNLWTDNSGGNKIQYHEAGTEREEGLFVTDNIEDLVRSGRFQYKDISILYRT
NAQSRTIEETFVKAGIPYQMVGGTKFYDRKEIKDMLAYLRLIANPNDDLSYQRVVNEPKR
GVGKTSLEKLQRYAADHDISLYEASAEIDFVGVSAKAAKSIMNFYSMIRNWTQQQEFLSA
TDMVQEVIDKTGYEEMLRNEKSLEAQSRLENIEEFKSVTKNFEENSEDKTLVAFLTDLAL
IADIDQMNEDPTSDDTVTLMTLHSAKGLEFPVVFLIGMEENVFPHTRSLMDDEEMEEERR
LAYVGITRAERQLFMTHAKMRTLYGRTNMNPISRFINEIPEDLVDGKEKQEELPFFNKRR
ESAAFSPQPPKHEPKRAAKKVEKGSSGGEKISWQPGDKASHKKWGEGTVVKVQGEGDAME
LDIAFPAPTGIKRLLARFAPITKS
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaagcaatgaatcctctccttaaaggattgaatgaacagcaacgaaatgcggtg
acccataccgagggaccactgctgattatggccggagccggaagtggaaaaacacgagtc
ttaactcatcgtatcgcttacttactgggtgagaaggaggtcgctcctcgtaatgtgctg
gcgattacgtttaccaataaagcagcacgtgagatgaaagaacgtgtcgaggaattagtt
ggacctgaaggtgaaaagatctggatgtcgacatttcactccatgtgtgtgcggattcta
aggagagatattgatcggatcgggtatgaccggaatttctcaattctcgactcaagtgac
cagctctccgtgattaaacaagtgttgaaggaactgaaccttgatcctaaaaagtgggtt
ccgcgagccatgcttggagcgatcagtaatgctaaaaatgaattactgacgcccgaagag
tacacccgcgatgcagcgagcatccatgaagaaaaaatcgcagaagtatataaaggctac
cagaagaagctgcgcaagaatcagtccctcgattttgatgacttaatcatgcagacattg
aacttatttgatcgtctccccgaagtgctcgagtattatcagcgccgctttcaatatatc
catgtcgatgagtatcaggatacgaaccatgctcagtatcaacttgttacgcaattatcc
agccgctatcagaacctatgtgtagttggggattctgatcaatcgatttatcgctggcga
ggggcggatattaaaaacattctttcgtttgaaaaagattatccaagcgcccagaccatt
atgcttgaacaaaattaccgctccacggagcttattttgaatgcagccaacaatgtaatc
ggcaataacagcgggcgtaaagcgaagaatctctggacagataattctggcgggaacaag
attcagtatcatgaggctggaacggagcgcgaggaaggattatttgtaaccgacaacatt
gaagatctagttcgcagcggccgctttcagtataaagatatttccatcttgtaccgaacg
aatgctcagtcccgtacaattgaagaaaccttcgttaaagcaggaattccctaccaaatg
gtcggcggtacgaagttctatgaccgtaaagagattaaggacatgcttgcgtatttacga
ttaattgctaacccgaatgatgatttgagctatcagcgtgtagttaatgaaccgaagcgg
ggagttggaaagactagtcttgagaagctgcagagatacgctgctgatcatgatatttct
ctttacgaagcttcagcagaaatcgactttgtaggcgttagtgcaaaagcagctaaatcg
attatgaacttctattcgatgattcgaaactggacacagcaacaggaatttctatcagcg
accgatatggtacaagaagtgattgataagacaggctatgaagaaatgcttcgaaatgaa
aaaagccttgaagctcaaagccgtttagagaacattgaagaatttaaatcggtcacgaaa
aattttgaagaaaatagtgaagataaaacacttgtagctttcttgacagacctggccctg
attgctgatatcgatcaaatgaatgaagacccgacgagtgatgatacggtgactctcatg
acgcttcactctgcgaaagggctggaatttcccgttgtctttctaatcggaatggaggag
aacgtttttccccacacccgctctcttatggacgatgaggagatggaagaagaacgacgc
cttgcgtatgtaggaattacgcgtgcagaacgtcagctgtttatgacgcatgctaagatg
cgcacactatatggcaggaccaacatgaacccaatcagtcgttttattaatgagatacca
gaagatctcgtggatggaaaagaaaaacaggaagagttgccctttttcaataaaagacgt
gaatcagcagctttttctccccagcctcctaagcatgaaccaaagcgggcggcgaagaag
gtggagaaaggttcatcaggcggtgaaaaaatttcctggcagccaggggataaagcaagc
cacaagaaatggggcgaaggaacggtcgttaaagtccaaggagaaggtgacgccatggag
cttgatattgcttttccggctccaacggggatcaaacgtctcctggctcgatttgcaccg
ataacgaaatcgtaa
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