Halobacillus naozhouensis: P9989_12005
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Entry
P9989_12005 CDS
T09043
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hnz
Halobacillus naozhouensis
Pathway
hnz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P9989_12005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hnz03019
]
P9989_12005
03400 DNA repair and recombination proteins [BR:
hnz03400
]
P9989_12005
Enzymes [BR:
hnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P9989_12005
Messenger RNA biogenesis [BR:
hnz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P9989_12005
DNA repair and recombination proteins [BR:
hnz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P9989_12005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
TFIIE_alpha
Say1_Mug180
RecQ_Zn_bind
LAMB1
Motif
Other DBs
NCBI-ProteinID:
WFT73131
LinkDB
All DBs
Position
complement(2285286..2286824)
Genome browser
AA seq
512 aa
AA seq
DB search
MRNFNLKEKLYEHFGYLQFRQGQEEIIQQVLEGRDVLGILPTGVGKSLCFQLPSKLLSGS
TVVVSPLISLMIDQVKQMKSAGFKSVVSLNSFMDHREKRVVLEHLDQYSLIYLSPEMLQN
ELVMYQLIKLHIDLFVIDEAHCISQWGHEFRTDYLKLSRSIEQVGNPPVLALSATATPEV
QTDIKQQLVRPEMLSVVYPMDKVNMSFAVEETSSHEEKLERITQVLSHKKAPTMIYFSSR
MWAERVSEELKTKVDQRIAFYHGGMEQMDRLLVQQQFMNDQLDVICCTSAFGMGVDKSNI
RRVIHYHFPTELESFIQEIGRAGRDGKPCASLMLYTPGDYHLPQMFIQNELVKPEDVEGV
LHSVYDIVYKQETELNDEEMSEELKLSETQWNFIKYQLEQEKLINHGPVIRDKHKWGQTT
EKIQWILENRWKYKSRKLQEMVSWLHHPDCKRKKLYTPFQPDTRTPEVACCSNCGFRMED
MELDIEPYSATFTDWKSRLEKIFHQGAYHATD
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaattttaatttaaaagagaagctttatgaacatttcggttaccttcagtttaga
caaggacaagaggagattattcaacaggtgcttgaaggcagagatgtattaggtatctta
ccgactggtgttggaaagtcactctgttttcagcttccttctaaacttctttctgggagc
acggtcgttgtgtcaccgctcatctcactaatgatcgaccaggtaaagcaaatgaaatca
gctggatttaagtcggttgtttcattaaacagctttatggatcatagagaaaagcgtgtg
gttttggaacacctggatcaatattcgttgatttacctttcacctgaaatgctgcaaaat
gagttagttatgtatcaattgataaaactgcacattgacctgtttgttattgacgaagcc
cactgcatttcacaatggggtcatgaatttaggactgattatttaaaactaagccggtcg
attgaacaggttggtaaccctccagttctggctctaagcgccacggcaactcctgaggtt
caaactgatatcaaacaacagctggtccggcctgagatgttatcagttgtctatccaatg
gacaaagtaaatatgagttttgctgtagaagagacaagcagtcatgaagaaaagttagag
cgaatcactcaagtattatcacataaaaaagcacccactatgatctatttctccagtcgg
atgtgggccgaacgggtgtcagaagagctgaaaaccaaagtggaccaaagaattgcattt
tatcatggaggtatggagcaaatggaccggctcctcgtacaacagcagttcatgaatgac
cagttagacgtaatttgttgtacaagtgcttttggcatgggggttgacaaatcaaacatt
cgccgggtaattcactatcatttccctacagaactggaatcatttatacaggaaattggt
cgggccggaagagatgggaagccctgtgcaagtttgatgttgtacactcctggtgattac
cacttgcctcaaatgtttatccagaatgaactggtaaaaccagaggatgttgaaggtgtt
cttcattcagtctatgacattgtgtataaacaggaaactgagttgaatgatgaagaaatg
tcggaggagttgaagttatctgaaacgcagtggaattttattaaataccagctggagcag
gagaagctaattaatcatggccctgttattagagataaacataagtggggacaaacgaca
gagaagattcagtggattcttgaaaacagatggaagtataaaagtagaaaactccaggaa
atggtgagctggcttcatcatccagattgtaaaaggaaaaagctttatactcctttccaa
cctgacacgagaactccggaagtagcatgttgcagcaactgtggttttcgtatggaagat
atggagttagacatagaaccctattctgctacatttactgactggaagtcgcggttagaa
aagatctttcatcaaggagcctaccatgcaactgactaa
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