Halobacillus naozhouensis: P9989_13180
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Entry
P9989_13180 CDS
T09043
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
hnz
Halobacillus naozhouensis
Pathway
hnz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hnz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
P9989_13180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hnz03400
]
P9989_13180
Enzymes [BR:
hnz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
P9989_13180
DNA repair and recombination proteins [BR:
hnz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
P9989_13180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_12
AAA_22
nSTAND3
AAA_16
HHH_5
TsaE
AAA
DEAD
NPHP3_N
AAA_28
DUF815
Herpes_Helicase
AAA_18
RsgA_GTPase
Exo_endo_phos_2
UvrD-helicase
Zeta_toxin
TrwB_AAD_bind
DUF6503
HTH_IclR
NACHT
AAA_24
AAA_17
PolyA_pol
Motif
Other DBs
NCBI-ProteinID:
WFT73345
LinkDB
All DBs
Position
complement(2498096..2500420)
Genome browser
AA seq
774 aa
AA seq
DB search
MAERTLFSETSEERPYIKGELGRMIFHKESEHFSIASIIVQETNEDFDERSVVIKGHFPP
LEDGETYIFHGVFLEHKKFGRQYQVEFYQRVLPETKDGLVVYLSSDLFHGIGKKTAERVV
DQLGEQAISAILEDPDVLKKVPKLPKEKRETLYNTLKEHQGFEHVMIHLNQYGFGLKLSQ
KIYEAFKDQTLAIIEEDPYQLVFKVDGFGFHRADEMAKVQKLPLDHPTRLRAACLYILQQ
SLSAGHVYLPTASCLSQVENLLNSSSGEKSITFDQLSEQVIRLAEDRYVFIEEDRVYLPS
LFHAENGFCHQLERIMEQELETEHTQAELLKIVGDMEEEESISYGEDQFAAIEKALQSKV
MILTGGPGTGKTTVIKGIIKAYSTLYDLSTDKGDYDQGEPFPFILAAPTGRAAKRMTEST
GLPASTIHRLLVWDGHDSFDKNQNNQLEGKLLIIDEFSMVDMWLANQLFRAIPSDMQVLI
VGDEDQLPSVGPGQVLADLLASNQLPSVQLSEVYRQKEGSKIIQLAHEIKNDQCTRQSLT
KEHDFNFINAREHQLKDLVTNIVKKALDKGIELREVQVLAPMYRTDVGIHKLNEEIQRVV
NPKSKQKRDLTFKDLTYRKGDKVIQLVNQPEDGVYNGDIGEIAAIFRAEENVDQVEQVVV
DYDGKEVVYPKKNLNNIMHAYCTSIHKSQGSEFSIVILPVVRSYRRMLRKNLLYTAITRS
KHSLIICGDTNAFLEGVQTTDTNLRYTHLVEKLQNETVNELNEEEEELSPYDFM
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacgaacgctattttctgagacaagtgaagaacgcccatatataaaaggagaa
ctgggccggatgatttttcataaggagtcggagcacttttcaattgcttccataatcgtg
caggaaacgaacgaagacttcgatgaaagaagcgtagtgattaaaggtcattttcctcct
ctcgaagatggggaaacttatatttttcatggtgttttcctggagcataaaaagttcgga
cgtcaataccaggtcgaattctatcaacgggtacttccggaaactaaggatggattggtt
gtttatttatcgagcgatctttttcacggcattggcaaaaaaacggccgaacgggtggtt
gatcaattaggtgagcaagctatttccgcaattttggaagatccagacgttttgaaaaag
gttcccaaacttccgaaagaaaaacgtgaaacgctttacaatacgttaaaggaacatcaa
ggatttgaacatgtaatgatccacctgaatcagtatggcttcggtcttaagctttcacag
aagatttatgaagcatttaaagatcaaacacttgccattattgaggaggatccttatcaa
ctggtgttcaaggtggatggctttggctttcaccgtgcggatgaaatggcaaaagtccag
aaattaccgcttgatcatccaacaagactgcgagcagcatgtttatatatcttgcaacag
agcctatcggctggccatgtatatttgccgacagcgtcctgtttatctcaagtggaaaac
cttcttaatagcagcagtggggagaaatcgattactttcgatcaattatccgaacaagtt
attcgcctggcagaagaccggtatgtctttatcgaagaagaccgtgtttacttgccatcc
ctttttcatgcagaaaatggcttctgccaccagcttgaaagaatcatggagcaagaactc
gaaacggagcatactcaggcagagctgttaaagattgttggcgatatggaagaagaagag
tcgattagttatggtgaagaccagtttgcggcaatcgagaaagcactgcaatcgaaagtt
atgattctgacaggaggtccggggactggtaagaccacagtgattaaaggcattattaag
gcatattcaacactttatgacctgtctaccgacaaaggtgattacgatcagggagagcct
tttccctttatacttgctgccccgaccggtcgtgccgccaagcgtatgacagagtcaacc
ggcctgccagccagcacgatccatcgattgctcgtctgggatgggcatgacagttttgat
aaaaatcaaaacaaccaacttgaagggaagctattaattattgatgaattctcgatggtt
gatatgtggcttgccaaccaattgttccgcgccattccctctgatatgcaagtcttgatc
gtcggggatgaggaccagctgccatctgtcggcccaggtcaagtattggcagatttatta
gcgtccaaccagcttccttctgttcaactatcagaggtgtacagacagaaagaaggatca
aaaataattcagcttgcccacgaaattaaaaatgaccagtgtaccagacagtcgctgacg
aaagagcatgattttaattttataaatgcgcgggagcatcagctgaaagatttggttacg
aatattgtcaagaaggccttggataaaggaatagaattacgagaggtgcaagtcctggcc
ccgatgtatcgaacagatgtcggcattcataaattgaatgaagagatccagcgtgttgta
aatccaaaaagtaagcaaaagcgtgatctgacgtttaaagatctgacttaccggaaaggc
gacaaggtgatccagcttgtcaatcagccggaagatggtgtttataatggcgatatagga
gaaattgcagctattttccgagcagaagaaaacgtggatcaagtggagcaggtcgtcgtc
gattatgatggtaaagaagtcgtctatccaaaaaaaaaccttaataacatcatgcatgcc
tattgcacgtccattcataaatcgcagggaagcgaattttctattgtgattttgcccgtt
gtacgcagctatcgcagaatgctcaggaaaaatctgttgtacacggcaataacgagatcg
aagcattctcttattatatgcggggacacaaatgctttcctcgaaggtgtgcagacgact
gatacaaatttaaggtatactcacttagtagaaaaactgcagaacgaaacggttaatgag
ttgaatgaggaagaagaggaactttccccttatgattttatgtaa
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