Halobacillus naozhouensis: P9989_16670
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Entry
P9989_16670 CDS
T09043
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
hnz
Halobacillus naozhouensis
Pathway
hnz02020
Two-component system
hnz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hnz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
P9989_16670 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
P9989_16670 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hnz03021
]
P9989_16670 (rpoN)
Transcription machinery [BR:
hnz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P9989_16670 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_Tnp_ISL3
Sigma70_r4
HTH_23
HTH_3
LacI
Death
HTH_IclR
Fe_dep_repress
DUF6641
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
WFT73988
LinkDB
All DBs
Position
3213342..3214655
Genome browser
AA seq
437 aa
AA seq
DB search
MKLELLQKQKMVMTPHLNQAITMLQYNTVEMEQFIQEESLENPMIELEEPKQDVSFSEDI
PMSTYQAKPSSYMEEDQLDTLSGEEKCLTDHLNDQVCLLNLQEKERVILNYLILSLDENG
YLTICSDEAARLLRVSEADVENGISLLQQLEPAGVGARSLQECLLLQLGAYHPHDQAAEQ
VISEHLNELAQHNWKQLASLLAISLEQVKSIAQLIQSLDPKPGAAISPPSTKYLVPDIIL
EKVAGTYTISLNDRFIPGIRLNKQYSNYLGQNNDASAYLSKHYQRYMWLLKSIEQRRTTI
VNVTKVIIEKQMDFLETGNMGALQPMTMKDVAEEIDVHESTVSRATKNKVIQTPKGTYEL
RLFFTSKLGENEDGTSSAKVKTLLKQLITSENKKRPLSDQKISDHFKNEEDVKVSRRTIA
KYREELRILPSSRRKEI
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttagagcttttacaaaaacaaaaaatggtcatgacacctcatttaaatcaggcc
attaccatgcttcaatataacacagtggaaatggaacagttcattcaggaagaatcactg
gaaaatccgatgatcgaactggaagagcctaaacaggatgtttctttttccgaagatata
ccaatgtccacttatcaggcaaaaccgtcttcttatatggaagaagaccaactggacacg
ttaagcggggaagaaaaatgcttaacagaccatttaaacgatcaggtatgcttacttaat
ctgcaggaaaaagagcgagttatcctaaattatctgattctcagcctcgatgaaaacgga
tatttaacgatctgctctgatgaggcggcgcgtttattgcgagtatcagaagcagacgta
gaaaacgggatcagcttactgcagcagctcgaaccagccggtgtgggtgcgagaagttta
caggaatgcctgctcttacaattaggagcttatcatccccatgaccaggcagccgaacaa
gtcatctcagagcatctgaacgagttagcccaacataattggaagcaactcgccagcctg
cttgcgatctcattggaacaagtgaaatccatagcacagctcattcagagtcttgatcca
aagcctggtgctgctatctcgcccccatcaaccaagtatcttgtacccgatattatcctt
gaaaaagtggcgggtacgtatacgatctcgcttaatgatcgatttatccctgggattagg
ttgaataaacagtactctaattacttagggcagaataacgatgcttccgcttatctttcg
aagcattaccagcgatacatgtggctcttaaagagcatagaacaacgacgcaccaccatt
gtcaacgtgacgaaagtgatcattgagaaacaaatggattttctggaaacgggaaatatg
ggagcgcttcaaccgatgacgatgaaggatgtggcagaggaaatcgatgttcatgaatcg
accgtgagccgagccacgaaaaataaagtgatacaaacacctaaaggaacctatgagctt
cgcctgttctttacttctaaactgggggaaaatgaagatggcacatcgtcggccaaggtg
aaaactttgttaaaacaactcattactagtgaaaataaaaaaagaccgctttcggaccag
aaaatatcagaccactttaaaaatgaggaagacgtgaaagtatccagaaggaccattgct
aagtatcgggaagaattaaggattttgccgtcctcaaggcgcaaagaaatctaa
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