Hoeflea alexandrii: ABWH89_01745
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Entry
ABWH89_01745 CDS
T11168
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hoax Hoeflea alexandrii
Pathway
hoax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hoax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABWH89_01745 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoax03019
]
ABWH89_01745 (pnp)
03016 Transfer RNA biogenesis [BR:
hoax03016
]
ABWH89_01745 (pnp)
Enzymes [BR:
hoax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ABWH89_01745 (pnp)
Messenger RNA biogenesis [BR:
hoax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ABWH89_01745 (pnp)
Transfer RNA biogenesis [BR:
hoax03016
]
Prokaryotic type
tRNA degradation factors
ABWH89_01745 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
S1_RRP5
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
XHC38078
LinkDB
All DBs
Position
complement(370290..372410)
Genome browser
AA seq
706 aa
AA seq
DB search
MFDTHKVEIEWGGRPLTLETGKVARQADGAVIASYGETTVLATVVSAKSPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSENETLTSRLIDRPLRPLFPDGYKNDTQIIITVLQH
DLENNPDILALVAASAALTISGIPFMGPIAGARVGYINGDYVLNPHVDEMPESALDLIVA
GTSDAVLMVESEAKELGEEVMLGAVMFGHKSMQPVIDAIIKLAEAAAKEPRDFAAPDHSE
LEAEMLAMCEADLRKAYENTDKAARYAAIDEVKAKVKDHFAPAEGEEPRFTSEVIGAVFK
SLQAKVVRGAILETKSRIDGRDLSTVRPIVSEVGLLPRTHGSALFTRGETQAIVVATLGT
GEDEQYVDSLTGTYKATFMLHYNFPPYSVGETGRTGSPGRREIGHGKLAWRAIHPMMPSP
EQFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLIKEGDQFAVL
SDILGDEDHLGDMDFKVAGTSDGITALQMDIKIDGITEEIMQIALGQAKDGRLHILGEMG
NALSESRGQLGEFAPRIEVMNIPVDKIRDVIGTGGKIIREIVEKTGAKINIDDDGTIKIA
SSSGKEIEAAKKWIHSIVAEPEVGVIYEGTVVKVADFGAFVNFFGPKDGLVHISQLAAER
VAKTSDVVKEGQKVWVKLLGFDERGKVRLSMKVVDQETGKEVEAGE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatacccacaaggtcgagattgaatggggcggtcgtccgctcacactggaaacc
ggcaaggttgcccgccaggccgatggcgccgtcatcgcctcctacggcgagaccaccgtg
ctcgccaccgtcgtttcggcgaaatcgcccaagcccggccaggatttctttccgctgacc
gtcaactaccaggaaaagacctatgcggccggcaagatccccggcggctatttcaagcgc
gaaggccgcccgagcgaaaacgagacgctgacgtcgcgcctcatcgaccgcccgctgcgc
ccgctctttcccgatggctacaagaacgacacccagatcatcatcaccgttctgcagcat
gacctggaaaacaaccccgacatcctggcactggtcgcagcctcggctgccctgaccatc
tccggcatccccttcatgggcccgattgcaggcgcccgcgtcggctacatcaacggcgat
tacgtgctcaacccgcatgtcgacgaaatgccggaatcggcgctcgaccttatcgttgcg
ggcacttccgacgccgttctgatggttgaatccgaagccaaggaactcggtgaagaagtc
atgctcggcgcggtcatgttcggccacaagtccatgcagccggtcatcgacgcgatcatc
aagctcgccgaagccgcagcgaaagagccgcgcgactttgccgctccggatcattccgaa
cttgaagccgaaatgctcgccatgtgcgaagcggatctgcgcaaggcctatgagaacacc
gacaaggcagcgcgctacgccgccatcgatgaggtcaaggccaaggtcaaggaccacttt
gcaccggctgagggcgaagagccccgctttacgtccgaagtcatcggcgctgttttcaag
tcgctgcaggccaaggtcgtccgcggcgccatcctcgagaccaagagccgcatcgacggc
cgtgatctgtcgaccgtgcgcccgatcgtttcggaagtgggccttctgccgcgcacccat
ggctcggcgctgttcacccgcggcgaaacccaggccatcgtcgttgccacgctcggcacc
ggcgaggacgaacagtatgtcgacagcctgacggggacctacaaggccaccttcatgctg
cactacaacttcccgccctattcggtcggtgagaccggccgtaccggttcgcccggccgc
cgcgaaataggccacggcaagcttgcctggcgcgccatccacccgatgatgccgtcgccc
gagcagttcccctacacgctgcgcgtggtctccgagatcaccgaatccaatggttcgtcc
tcgatggccaccgtctgcggcacctcgctggcgctgatggatgcaggcgtgccgctggcc
aagcccgttgccggtatcgccatgggcctgatcaaggaaggcgaccagttcgccgtcctt
tccgacattctcggtgacgaggatcacctgggcgacatggacttcaaggtcgccggtacc
tccgacggcatcaccgccctgcagatggacatcaagatcgatggcatcaccgaggaaatc
atgcagatcgcgcttggccaggccaaggacggccgcctccatatcctcggcgaaatgggc
aacgccctgtccgaaagccgcggccagctgggtgaattcgctccgcgcatcgaggtcatg
aacatcccggtcgacaagatccgtgacgtcatcggcaccggcggcaagatcatccgcgaa
atcgtcgagaagaccggcgccaagatcaacatcgacgacgacggcaccatcaagatcgcc
tcgtcctcgggcaaggaaatcgaggccgccaagaagtggatccattcgatcgttgcagag
cccgaagtcggtgtgatctatgaaggcaccgtcgtaaaggtcgccgatttcggcgccttc
gtgaacttcttcggtcccaaggacggcctggtccacatctcgcagctggctgccgagcgt
gtcgccaagacctccgacgtggtcaaggaaggccagaaggtctgggtcaagctcttgggc
ttcgacgagcgcggcaaggtccgcctgtcgatgaaggtcgttgaccaggaaaccggcaag
gaagtcgaagccggcgagtaa
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