Hoeflea alexandrii: ABWH89_01760
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Entry
ABWH89_01760 CDS
T11168
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hoax Hoeflea alexandrii
Brite
KEGG Orthology (KO) [BR:
hoax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hoax03016
]
ABWH89_01760 (truB)
Enzymes [BR:
hoax01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ABWH89_01760 (truB)
Transfer RNA biogenesis [BR:
hoax03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABWH89_01760 (truB)
Prokaryotic type
ABWH89_01760 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
XHC40037
LinkDB
All DBs
Position
complement(373688..374623)
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AA seq
311 aa
AA seq
DB search
MGRRGKKKGRPVSGWLVLDKPWDFGSTEAVSKIKWLFKAEKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVAWGEERNTDDLEGKVTASSDARPDKAAIEAILPAYTGVI
EQVPPAFSAVKIAGERAYDMARDGEVVEIPAREVEIHRITLLGCPDADHAVFEVECGKGT
YVRALARDFGRQLGCYGHISALRRTMVAPFSEEVMVPLADLVALEEIEDDTERLARLDAY
LVPAGEALGMLPRIDVSEDQAHRIRMGNPIILRGRDAPVATDDACAFVRGQLLSIGEVAG
GEFRPRRVFKT
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtcgtggcaagaagaagggccgtccggtttccggctggctggttctcgacaag
ccttgggatttcggctcgaccgaggctgtctcgaagatcaagtggctgttcaaggccgaa
aaggcaggtcatgccggcacgctcgatccgctggcctcgggcatgttgccgatcgcgctg
ggtgacgccaccaagacggtcccctatgtcatggacggccgcaagatctatgagttcacc
gtcgcctggggcgaggagcgcaacaccgacgatctcgagggcaaggtgacggcaagttcc
gacgcgcgccccgacaaggcggccatcgaggctatcctgccggcctataccggcgtcatc
gagcaggttccgccggccttttccgcagtcaagatcgccggcgagcgtgcctatgacatg
gcgcgtgacggcgaggtggtggaaatccccgcccgcgaggtcgagatccaccgcatcacg
ctgctgggatgtccggacgccgaccatgcggtgttcgaggtcgagtgcggcaagggcacc
tatgtgcgggcgctggcccgcgattttggccgtcagcttggctgctacggccatatctcg
gccctgcgccgcaccatggtcgctccgttttcagaagaggtgatggtgccgctcgccgat
ctggtggctctcgaggaaatcgaggacgataccgagcggcttgcccggttggatgcctat
ctggtgcctgcaggcgaggcgctcggcatgctgccccgcatcgatgtcagcgaggatcag
gcccatcgcatccgcatgggcaacccgatcatcctgcgcggacgcgatgcgccggtcgca
accgacgatgcttgcgccttcgtccgcggccaattgctctcgatcggcgaagtcgccggc
ggcgagttccgtccccgccgggtgttcaagacctga
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