Hoeflea alexandrii: ABWH89_02175
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Entry
ABWH89_02175 CDS
T11168
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
hoax Hoeflea alexandrii
Pathway
hoax03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hoax00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
ABWH89_02175 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hoax03011
]
ABWH89_02175 (rpsA)
Ribosome [BR:
hoax03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
ABWH89_02175 (rpsA)
Bacteria
ABWH89_02175 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5
OB_RRP5_4th
DUF5446
Motif
Other DBs
NCBI-ProteinID:
XHC38155
LinkDB
All DBs
Position
complement(468365..470071)
Genome browser
AA seq
568 aa
AA seq
DB search
MSNTETMTEDFASLFAESIATQDLAEGYVAKGIVMAIEKDVAIIDVGLKVEGRVPLKEFG
AKAKDGTLKVGDEVEVYVERIENALGEAMLSREKARREESWVRLEEKFNAQERVEGVIFN
QVKGGFTVDLDGAVAFLPRSQVDIRPIRDVSPLMHIPQPFEILKMDKRRGNIVVSRRTVL
EESRAEQRSEIVQNLEEGQTVEGMVKNITDYGAFVDLGGIDGLLHVTDMAWRRVNHPSEI
LSIGQTVKVQIIRINQDTHRISLGMKQLESDPWDGIGVKYPAGKRITGTVTNITDYGAFV
ELEPGIEGLIHVSEMSWTKKNVHPGKILSTTQEVDVVVLEVDPNKRRISLGLKQTLENPW
EVFAQSHPAGTEVEGEVKNKTEFGLFIGLEGDVDGMVHLSDLDWNRPGEQVIEEFNKGDM
VKAVVLDVDVDKERISLGIKQLGKDSIGEAAASGELRKNAVVSAKVTAVTDGGLEVVLVD
HEDLSSFIRRSDLSRDRDEQRPERFSVGQTVDARVTSFSKKDRKVGLSIKALEIAEEKQA
VAQFGSSDSGASLGDILGAALKKQNSDD
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacactgaaaccatgacagaggatttcgcatccctgttcgccgaatccattgcc
acgcaggacctcgccgaaggctatgttgccaagggcatcgtcatggccatcgagaaggac
gtcgccatcatcgacgtcggtctcaaggtcgagggccgcgtaccgctgaaggaattcggc
gccaaggcgaaggacggcacgctcaaggtcggcgacgaagtcgaagtctatgtcgagcgc
atcgaaaacgccctgggcgaagccatgctgtcgcgcgagaaggctcgccgcgaggaaagc
tgggttcgtctcgaagagaagttcaatgcgcaggagcgtgttgaaggtgtcatcttcaac
caggtcaagggcggcttcaccgtcgatctggacggcgccgtggcgttcctgccacgcagc
caggtggacatccgtccgatccgcgacgtctccccgctgatgcacattccgcagccgttc
gaaatcctcaagatggacaagcgccgcggcaacatcgtggtctcgcgccgcaccgtgctc
gaagagagccgtgccgaacagcgttcggaaatcgtgcagaacctcgaggaaggccagacc
gttgaaggcatggtcaagaacatcaccgattacggtgcgttcgttgatcttggcggcatc
gacggcctgctgcacgtcaccgacatggcctggcgccgcgtcaaccatccgtcggaaatc
ctgtcgatcggccagaccgtcaaggtccagatcatccgcatcaaccaggacacacaccgc
atctcgctgggcatgaagcagctggaaagcgatccgtgggatggcatcggcgtcaagtac
ccggccggcaagcgcatcaccggtaccgtgaccaacatcaccgactacggcgcattcgtc
gagctggagccgggcatcgaaggcctgatccacgtttcggaaatgtcctggaccaagaag
aacgtgcaccccggcaagatcctgtcgacgacacaggaagtcgacgtggtcgttctcgaa
gtcgacccgaacaagcgccgcatctcgctcggcctcaagcagacgctcgagaatccgtgg
gaagtgttcgcgcagagccaccctgccggcaccgaagtcgaaggcgaagtcaagaacaag
accgaattcggcctgttcatcggcctcgaaggcgatgtcgacggcatggttcacctctcc
gacctcgactggaaccgtccgggcgagcaggtcatcgaggagttcaacaagggcgacatg
gtcaaggccgtcgtgctggacgtcgatgtcgacaaggaacgcatctcgctgggcatcaag
cagcttggcaaggactcgatcggcgaagcagccgcttcgggcgaactgcgcaagaacgcc
gtcgtctccgccaaggtgaccgctgtcaccgatggtggcctcgaagtggttctggttgat
cacgaagacctgtcttcgttcatccgccgctccgacctgtcgcgtgaccgtgacgagcag
cgccccgagcgcttctcggtcggccagacggtcgacgcccgcgtcaccagcttctccaag
aaggaccgcaaggtcggcctgtcgatcaaggcgctggaaatcgccgaagagaagcaggca
gtcgcccagttcggctcgtccgactcgggcgcctcgctcggcgacattctcggcgcagca
ctcaagaagcagaacagcgacgactga
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