Hoeflea alexandrii: ABWH89_02930
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Entry
ABWH89_02930 CDS
T11168
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hoax Hoeflea alexandrii
Pathway
hoax03030
DNA replication
hoax03410
Base excision repair
hoax03420
Nucleotide excision repair
hoax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hoax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABWH89_02930 (polA)
03410 Base excision repair
ABWH89_02930 (polA)
03420 Nucleotide excision repair
ABWH89_02930 (polA)
03440 Homologous recombination
ABWH89_02930 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hoax03032
]
ABWH89_02930 (polA)
03400 DNA repair and recombination proteins [BR:
hoax03400
]
ABWH89_02930 (polA)
Enzymes [BR:
hoax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABWH89_02930 (polA)
DNA replication proteins [BR:
hoax03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ABWH89_02930 (polA)
DNA repair and recombination proteins [BR:
hoax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ABWH89_02930 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABWH89_02930 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
DprA_N
S-methyl_trans
Transposase_20
HHH
Motif
Other DBs
NCBI-ProteinID:
XHC38297
LinkDB
All DBs
Position
639797..642742
Genome browser
AA seq
981 aa
AA seq
DB search
MKKGDHLFLVDGSGYIFRAYHALPPLTRKSDGLPVGAVSGFCNMLWKLLSEARDTSVGVT
PTHFAVIFDYSSKTFRNELYPEYKANRSAPPEDLVPQFAVIREATRAFDLPCIEMEGFEA
DDLIATYARLAREAGADVTVISSDKDLMQLVGSQVSMYDSMKDRQIGVAEVIEKWGVPPE
KMIDLQALTGDSVDNVPGIPGIGPKTAAQLIEEFGDLDTLLERANEIKQNKRRENIIEFA
DKARISRELVRLKDDVEVTEKLDELVLNPLDGPKLVAFLKGMEFTSLTRRVAEATETDAS
AVDAAEVAVDAAAEMRGPDLNPGNAGKVGASGTSGKGDDTPQGLAKRRAEATASAKIDTS
AYETLRDIDQLKAWCAMARERGLVAFDTETTSLDAMQAELVGFSLALPETAPDTGELKVK
ACYAPLAHSNGAGDLLGGGGAQAGQMPMQEALSELKALLEDPAVLKIGQNLKYDMLVMAQ
HGITIESFDDTMLLSYVLEAGAGGHGMDSLSERWLGHTTIAYKDVTGSGKNAIPFAEVQI
DKATAYAAEDAEVTLRLWHVLKPRLVADGVASVYERLERPLAPVLMRMEKHGIRVDRQIL
SRLSGELAQGAAALEAEIQELAGENFNVGSPRQLGEILFDKMGLPGGTKTKTGQWSTTAQ
ALEDLAAAGHELPRKIVDWRQLTKLKSTYTDALPGFINPETKRVHTSFAMAATTTGRLSS
SDPNIQNIPVRTAAGRKIRTAFIAEPGNVLISADYSQIELRVLAHVANIPQLTQAFADGV
DIHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFGLANQLGIERSEAGEYIRKY
FERFPGIKDYMEATKAEAKENGYVKTIFGRRAHYPEIRSSNPQVRAFNERAAINAPIQGS
AADIIRRAMVRMEPALEKAGKKARMLLQVHDELIFETAEADAGSIIPVIVEVMENAAMPA
VDMAVPLKVDARAALNWDEAH
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggtgatcatctcttcctcgtcgacggctccggctacatattccgagcctat
cacgcattgccgccgctgacgcgcaaatccgacggcctgccggtcggcgccgtgtcgggc
ttctgcaacatgctgtggaagctgttgtcggaggcgcgcgacacgtccgtcggggtgacg
ccgacccatttcgcggtgattttcgactattcctcgaaaacctttcgcaacgagctctat
cccgaatacaaggccaaccggtcggctcctccggaggacctggtgccgcagtttgcagtc
attcgcgaggcgacgcgggcgttcgacctgccctgcatcgagatggaggggttcgaggcc
gacgacctgatcgccacctatgcgcggctggctcgggaagccggcgctgatgtcacggtg
atctcttcagacaaggacctgatgcagctcgttggttcgcaagtgtcgatgtatgacagc
atgaaggaccggcagatcggcgtggccgaagtcatcgagaaatggggcgtaccgcccgag
aagatgatcgacctgcaggcactgaccggtgattcggtcgacaacgtgccgggcatcccg
ggaatcgggccgaaaaccgcagcccagctgatcgaggaattcggcgacctcgacacgctg
ctggaacgtgcaaacgagatcaagcagaacaagcggcgcgaaaacattatcgaatttgcc
gacaaggcgcggatttcgcgcgaactcgttcgcctgaaggacgatgtcgaggtcaccgaa
aaactcgacgagttggtgctcaacccgctcgatggacccaagcttgtggcgttcctcaag
ggcatggagtttacatcgctgacgcgccgggtggccgaagccaccgaaaccgatgccagc
gcggtcgatgcggcggaggtagccgttgatgcagcagccgagatgcgcggtcccgatctc
aaccccggtaacgccgggaaggtcggggcttccgggacaagcggcaaaggcgatgataca
ccgcagggactggccaagcggcgcgcggaagctacagcctctgcgaagatagacacatcg
gcctacgaaacgctgcgcgatatcgaccagctcaaggcctggtgcgcgatggcacgcgaa
cgcggcctcgttgccttcgacaccgaaaccacctcgctcgatgcgatgcaggcggagctg
gtggggttctcgctggcgctgccggaaaccgcgcccgacaccggggagctgaaggtcaag
gcctgctatgcgccgcttgcccattccaacggcgctggcgacctgctcggcggcggcgga
gcgcaagccggccagatgccaatgcaggaggccttgagcgaactcaaggcgctgctcgag
gacccggcggttctcaagatcgggcagaacctcaaatacgacatgctggtgatggcgcag
cacggcattacgatcgaaagtttcgacgacacgatgctgttgtcctatgtgctcgaggcc
ggcgccggcgggcatggcatggactcgctgtcggagcgttggcttggccacaccaccatt
gcctacaaggacgtgaccggttcgggcaagaacgcgattccctttgccgaggtgcagatc
gacaaggcgaccgcctatgccgccgaggacgccgaagtcacgctccggctgtggcacgtg
ctcaaaccgcggctggtggcagacggggttgcatcggtctacgagcggctggagcggccg
ctcgcgccggtgctgatgcgcatggaaaagcatggaatccgggtcgaccggcagatcctg
tcacggctatcgggcgaactggcgcagggtgcggcagcgctggaggcggaaatccaggaa
ctggccggcgagaacttcaatgtcggctcgcccaggcagctcggcgagatcctgtttgac
aagatgggcctgccgggcggtacgaaaaccaagaccgggcaatggtcaaccaccgcccag
gcgctcgaggatctggccgccgccgggcatgagttgccgcgcaagatcgtcgattggcgg
cagctgaccaagctcaaatcgacctacaccgacgccctgcccgggttcatcaaccccgag
accaagcgggtgcacacgtcgtttgcaatggcggcaaccaccaccgggcggctctcctcg
tcggatccgaacatccagaacattccggtgcgtacggctgcgggccgcaagatccgcacc
gcctttattgccgagccgggcaatgtgctgatctcggccgactacagccagatcgaactc
cgggtgctggcgcatgtcgccaatattccgcaactgacacaggcgttcgcggatggtgtc
gacattcacgcgatgacggcgtcggaaatgttcggggttccggtggaaggcatgccgtcg
gaagttcggcgtcgggccaaggcgatcaatttcggcatcatctacggcatctccgccttc
ggccttgccaatcagcttggtatcgagcgctccgaggcgggcgagtacatccgcaaatat
ttcgagcgtttcccgggtatcaaggactacatggaagccaccaaagcggaagccaaggaa
aatggctatgtaaagaccatcttcggccgccgggcacattacccggaaatccgttcgtcc
aacccgcaggtccgcgccttcaacgagcgcgccgcgatcaatgcgccgatccagggatcc
gccgccgacattatccgccgcgccatggtgcggatggaaccggcgctcgagaaggccggc
aagaaagcccgcatgctgttgcaggtgcatgacgaactgattttcgagactgccgaggcc
gacgccggatcgatcattccggtgattgtcgaagtgatggaaaacgccgccatgccggcg
gtcgatatggcggtaccgctgaaggtcgacgcccgcgcggccctgaactgggacgaggcg
cactga
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