Hoeflea alexandrii: ABWH89_03130
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Entry
ABWH89_03130 CDS
T11168
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
hoax Hoeflea alexandrii
Brite
KEGG Orthology (KO) [BR:
hoax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hoax03400
]
ABWH89_03130 (addB)
Enzymes [BR:
hoax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABWH89_03130 (addB)
DNA repair and recombination proteins [BR:
hoax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ABWH89_03130 (addB)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
TraI_C
Motif
Other DBs
NCBI-ProteinID:
XHC38334
LinkDB
All DBs
Position
complement(693045..696251)
Genome browser
AA seq
1068 aa
AA seq
DB search
MSRAAPRIATIPPGVDFLATLAEQIIDGGLVPGLAYNPEDPLSLAGATVFVPTRRAARVL
RSELTDLIGKGSAILPTIRPLGETDDDAGFFDSADPETLALDPPIPPIAATLRLADLVLA
WKRTLPQKVRDHLGGVPLVAPANPADAIWLGRALSDLIQAVETEECDFAGLDDVASADLQ
QWWQLTAEFLKIAREYWPALLKEIHRSSPARHHNAMLDVFTRSLAASPAGRPVIVAGSTG
TRPSTARLIATVAHLPHGAVVLPGLDHAMRRSHWQALAEAATTRQAPDGRALVDVAIRSH
PQYGLHSLLGSCGVETGGIGDIPEIGGLSPELAIRRRLVSHALLPAIATEAWGEPDFLPG
PEAIVPGFEHVSLIEAANEREEASALAAAMRRALEPRPGVLEPTTALVTPDRNLARRVVT
ELARYGIEANDSGGSPLTSSLQGGLARLAVHVAFAPGDPVAIAALLKHPLARFGLSGPEA
RARAGFVERIALRGGSGSVDIEDLEALVSTRESGRRERHSARWLKRIGDGEAGQARDFAV
RASAALAPLTSLLVERAGPGVTNEIPIGRLAALTADALERICIDETGALDALWGDEAGAD
LAAVLLETRDSGSTLSMTGHEWIGALDALVSGRMIKPRAGGHPRAFIWGALEARLQHVDT
LLMGGLNEGVWPQAGQEDPFLSRSMKAAIGLEPPERRIGQAAHDFQMAMGAPEVVLSRAH
RSGKAPTVASRWLQRLLAVIGPEPVAMLRSRGEALLAHARTLDQGPSTPTASRPEPRPPQ
ELQPASYSFSEVGKLRRDPYAIYARRILGLDPLEPFLADPGPRERGTLYHEILEAFVTGA
VPGSRTLDMLRAIAAEHFTRAGLPDATALVWRMRFEKAAEAIAEWENDTAAGLVRSLVET
RASLDLPLAGLRLTGMADRLDLRRDGTAWIIDYKTGGTPSRKEARILLDPQLALEAYALI
NGGFKDVGSMPVSGLLYLRLTGRAPFAERIDTDPEKPGRDEFLSPADLATKAVEEFVKLV
GLLRSGRRGFLSRAIPRSARDFGGEYDHLARVAEWQTAVDGDGGDGDD
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgggccgcaccccgtattgcaaccatcccgcccggcgtggatttcctcgccacc
cttgccgagcagatcattgatggcgggctggtccccggcctcgcctacaatcccgaggat
ccgttgtcgctggccggcgccacggtattcgtgccgacgcgccgcgccgcccgggtgctt
cgctccgaactcaccgatctcatcggcaagggctcggccatcctgccgacaatccggcct
ctcggtgagaccgacgatgatgccggcttcttcgattccgccgaccccgaaacactggcg
ctggatccaccaattccgccgattgccgccacgctgcgccttgccgatctggtcctggcc
tggaaacggaccctgccccagaaagtcagggatcatctcggcggcgtgccgctggtcgcc
cccgccaacccggccgacgcgatctggctgggccgcgccctgtcggacctgatccaggcg
gtggagaccgaggaatgcgattttgccggtctcgatgatgtcgcgtccgcggatctgcag
caatggtggcagctgacagccgagtttctgaagattgcgcgggaatactggccggcgctg
ctcaaggaaatccaccggtccagcccggcgcggcaccacaatgcgatgctcgacgtgttc
acccgaagcctggccgcatccccggcaggccgcccggtcatcgttgccggctcgactgga
acccggccctcgaccgcccggctgattgccaccgtggcgcacttgccccacggcgccgtc
gttctgccggggctggatcatgccatgcggcgctcgcactggcaggcgctggccgaggca
gccacgacaaggcaagcgcccgatggtcgcgccctggtcgatgtcgcgatccgcagtcac
ccgcaatatggtctccactccctgcttgggagctgcggtgtcgagaccggcgggatcggg
gacatcccggagatcggcgggctttcgccggaactggcaattcgccgcaggctggtttcg
cacgcgttgttgcctgcgatcgccaccgaagcctggggtgagccggatttcctgccgggt
ccagaggccattgtcccgggctttgaacatgtcagcctgatcgaagccgccaatgagcgc
gaggaagcctccgccctggcggccgccatgcgccgcgcgctggaaccgcgccccggcgtt
cttgagccaaccaccgcgctggtcacgcccgaccgcaacctcgcccgccgggtcgtcacc
gaactggcccgctacggcatcgaagccaatgattccggcggttcgccgctgacctcgagc
ctgcagggcggtctggcgcggctcgccgtgcatgtcgcctttgcgccgggcgatccggtg
gcgatcgcggcactgctcaagcacccgctcgcccgctttggcctctcgggtcccgaagcc
agggcccgcgccggcttcgtcgagcggattgccctgcgtggcggcagcggttcagtcgac
atcgaggacctcgaagcgctggtcagcacgcgcgaatcaggacgccgcgagcgtcattcg
gcccggtggctgaagcgcatcggtgatggtgaggccgggcaggcgcgcgatttcgccgtc
cgggcctcagccgccctggctccgctgacttctctgctggtagagcgcgccggtccgggc
gttaccaacgaaatcccgataggcaggcttgcagctctaaccgccgatgcgctggagcgt
atctgcattgatgaaaccggagcgctggatgcgctctggggcgacgaggccggggccgat
cttgccgccgtgctgctcgaaacccgcgacagcggctcgacgctgagcatgaccggccat
gaatggatcggtgcactcgatgcacttgtttcgggccggatgatcaagccgcgtgccggc
gggcacccccgcgcctttatctggggagcgcttgaggcccggcttcagcatgtcgacacc
ttgctgatgggcgggctgaacgaaggcgtctggccgcaggccggccaggaagatccgttc
ctgtcgcgctcgatgaaggccgccatcgggcttgagccgccggaacgccgcatcggccag
gcggcgcatgatttccagatggcgatgggtgcgccggaagtggtgctgtcgcgcgcgcac
cgttccggcaaggcgccgaccgttgcctcgcgctggcttcagcggcttctggcggtgatc
ggtccggaacctgtggccatgctcaggtcacgcggcgaggcactgcttgcccacgcccgc
acgcttgatcagggaccttccacccccacagcctctcgcccggaaccacgcccgccgcaa
gagttgcagcccgcgagctactccttctcggaagtcggcaagctgcgccgcgacccctat
gccatctacgcccggcgcattctcggtctcgatccgctggagccctttctcgcggatccc
ggtccccgcgagcgcggcacgctctaccatgagatactcgaggctttcgttaccggagcc
gtgcctggttcgcgtaccctcgacatgcttcgcgcgattgccgcagaacatttcaccagg
gccggattgccggacgcaacggcgctggtctggcggatgcgctttgaaaaggcggccgag
gccatcgcggaatgggaaaacgacacggcggcgggactggtccggtcgctggtcgagacc
cgcgccagtcttgacctgccgctcgctggcctcaggctcaccggcatggccgaccggctt
gatctgcgccgggacggtacggcctggatcatcgactacaagaccggcggaaccccttca
cgcaaggaggcgcggatcctgctcgatccgcaactcgcgctcgaagcctatgcgctgatc
aatggcggctttaaagatgtcggcagcatgccggtctccgggctcttgtatctgcgcctg
accggcagggcgcctttcgccgaacgcatcgatacggatccggaaaagccgggccgcgac
gagtttctgagcccggctgatctggctaccaaggcggttgaggaatttgtcaagctggtc
ggtctgctccggtcgggccgtcgcggcttcctgtcgcgcgccatcccgcgcagcgctcgc
gattttggcggcgaatatgaccatcttgcgagggtcgccgaatggcagaccgccgtggac
ggcgatggaggtgatggcgatgactga
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