Hoeflea alexandrii: ABWH89_03910
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Entry
ABWH89_03910 CDS
T11168
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
hoax Hoeflea alexandrii
Pathway
hoax00300
Lysine biosynthesis
hoax00470
D-Amino acid metabolism
hoax01100
Metabolic pathways
hoax01110
Biosynthesis of secondary metabolites
hoax01120
Microbial metabolism in diverse environments
hoax01230
Biosynthesis of amino acids
Module
hoax_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hoax00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ABWH89_03910 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABWH89_03910 (dapF)
Enzymes [BR:
hoax01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ABWH89_03910 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
XHC38475
LinkDB
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Position
complement(844237..845115)
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AA seq
292 aa
AA seq
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MGSMVPFAKMNGLGNDIVVIDMRGRTDAVTAEAAIALASGDRTGFDQIMAIHDTDIDGVD
YRIDILNRDGSRSQACGNGTRCVVQALASETGRKSFTFKTLAGILTAEEHEDGLISVDMG
VPEFRWDRIPLAEEFYDTTRIELQVGPIDDPVLHSPSVMSIGNPHAIFWVKEDVWSYDLE
RFGPLLENHPIFPERANISIARVLNDQTLDLRTWERGVGLTRACGSAACAAAVCAARTDR
TRRRVTVNVPGGPLHIDWRASNHVIMTGPAEWEFSGTVDPLTGDWKADEAAA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgatggttccttttgccaagatgaacggactgggcaacgacattgtcgtcatc
gacatgcgtggcagaactgatgccgtgaccgcggaggccgccattgcgctggcgagcggc
gatcgtaccggtttcgaccagatcatggcaatccacgacaccgatatcgacggcgtggat
taccgcatcgacattctcaaccgcgacggctcccgctcccaggcctgcggcaacggcaca
cgatgcgttgtccaggcgctcgcctcggaaaccggacgcaagagtttcaccttcaagacg
cttgccggcatcctgaccgccgaagagcatgaagacgggctgatttcggtcgacatgggc
gtgcccgaattccgttgggaccggatcccgctggccgaagagttttatgacaccacccgc
atcgagttgcaggtcggaccgatcgacgacccggtgctgcattcgccttcggtgatgtcg
atcggcaacccgcacgccatcttctgggtcaaggaggacgtctggtcctatgatctcgag
cgcttcgggcctctgctggaaaatcacccgatctttcccgaacgcgccaatatctcgatt
gcccgggtcctgaatgaccagacgcttgatcttcggacctgggaacgcggtgtcggcctc
acccgcgcctgtggctcggccgcctgtgccgccgcggtctgcgccgcgcgcaccgatcgc
acccgccggcgcgtgaccgtcaatgtgcccggcggcccgcttcacatagactggcgcgcc
tccaaccacgtgatcatgaccgggccggcggaatgggaattctcgggaaccgtcgatccg
ctgaccggagactggaaggcggacgaggcggcggcgtga
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