Hoeflea alexandrii: ABWH89_07615
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Entry
ABWH89_07615 CDS
T11168
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
hoax Hoeflea alexandrii
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_7
Mg_chelatase
HTH_50
AAA
HTH_22
HTH_23
TetR_N
TIP49
Phage_CP76
IstB_IS21
HTH_29
Xre-like-HTH
HTH_17
CENP-B_N
PDE8A_N
HTH_IclR
AAA_2
HTH_28
HTH_Tnp_1_2
Motif
Other DBs
NCBI-ProteinID:
XHC39141
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Position
1631422..1632960
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AA seq
512 aa
AA seq
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MSKRILIVDDDPVQRRLLKAAAEKAGYEVELANEGRSALARLVQPDHELAAVVLDLMMPE
MGGLEVLERLSAVGNTIPVVVQTGQGGIETVVKAMRAGAFDFVVKPVSPERLTLALGNAL
KAARITSSQIPSLRHVGFNGIVAASPAMERVISLGKRAAASTIPVVLEGESGVGKEMIAH
AIQSESIRRNKPFVTVNCGAIPENLVESILFGHEKGAFTGATERHAGKFTEADGGTLFLD
EVGELPLEIQVKLLRAVQMGEIETVGSRMPRKVDIRLISATNKDLIEEVKAGRFREDLYY
RLNVFPIHVPALRKRKEDIPQLVRHFTERFAGAIGGKRIRSIAPDAMALLTAHDWPGNIR
ELENAIHRAIVLCDGETLTADLFPQIAAQIPGYKLDGLEAGDETQAVSLQAPQGPGLAQR
EEAAHADPTADPVLAEPSFPVDTGMPAVNAVTPEGEVRRLAEVEEELIRFALSFYRGQMS
EVARRLGIGRSTLYRKLKDYAINPDDPDQEAA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaaacgaattctgatagttgatgacgacccggttcagcgccgcctgctcaaggcg
gccgcggaaaaagcaggctacgaggtcgaactggcaaacgagggccggtcggctctcgcc
cgcctggtgcagcccgatcacgaactcgctgcagttgtgctcgatctgatgatgccggaa
atgggcgggctcgaagtgctggaacggctctcggcggtcggcaacaccattcccgtggtg
gtgcagaccgggcagggcggtatcgagaccgtggtcaaggcgatgcgcgcaggtgcattc
gattttgtcgtcaagccggtatcgccggaacgactgaccctggcgcttggcaacgcgctg
aaggccgcgcggatcacttcctcccaaattccctcgctgcgtcacgtcggcttcaatggc
atcgttgcggcaagccccgccatggaacgggtgatctcgcttggaaagcgggctgcggcg
tcgaccattccggtggttcttgaaggcgaatcgggtgtcggcaaagaaatgatcgcccat
gcgattcagtccgaaagcatccggcgcaacaaaccgttcgtgaccgttaattgcggggca
attcccgaaaatcttgtcgaaagcattcttttcggacacgaaaagggagcgttcaccggc
gcaaccgaacgccatgcgggcaaattcaccgaagctgatggcggtaccctcttccttgac
gaggttggtgaactgccacttgaaatccaggtcaagctgttgcgcgccgtgcagatgggc
gagatcgagaccgtcggttcgcggatgcccaggaaggttgacatccggctgatttcggcg
accaacaaggatctgatcgaagaggtcaaggctgggcgtttcagggaagatctctactac
cggctcaatgtcttcccgatccatgttccggccctgcgcaagcgcaaggaagacattccg
cagctggtgcgtcatttcaccgagcgatttgcgggtgccatcggcggcaagcggattcgg
agcatcgctccggatgcgatggcgctgctgaccgcacatgactggcccggcaatatccgc
gaacttgaaaacgccattcaccgggccatcgtgctgtgcgacggcgaaacgctgaccgcc
gacctgttcccgcagattgccgcgcagattcccggctacaagcttgatgggctggaagcc
ggagacgaaacccaggctgtgtctctgcaggcacctcagggtccgggactggcgcagcgg
gaagaagccgctcacgccgaccccactgccgatccggttctcgccgaaccgagctttccg
gtcgacacgggcatgccggcggtgaacgccgtgacgccggagggcgaggtgcggaggctt
gcggaagtcgaggaggaactgatccggtttgccttgtcgttctatcgcggacagatgagc
gaggttgcccgcaggctcggcatcggccgctcgacgctctaccggaagctcaaggactac
gcgatcaacccggacgatccggatcaggaggcggcgtga
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