Parahoeflea alexandrii: ABWH89_14400
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Entry
ABWH89_14400 CDS
T11168
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
hoax Parahoeflea alexandrii
Pathway
hoax03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hoax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABWH89_14400 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hoax03400
]
ABWH89_14400 (xth)
Enzymes [BR:
hoax01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ABWH89_14400 (xth)
DNA repair and recombination proteins [BR:
hoax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ABWH89_14400 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
XHC36144
LinkDB
All DBs
Position
complement(3048312..3049094)
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AA seq
260 aa
AA seq
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MKIVTWNINGVKARIDNLQTWLKESDPDIACLQEIKSVDEGFPRLELEALGYHVETHGQK
GFNGVAILSKKSPDEVNRGLPGDDSDEQARFIEAVFSTDGGVLRVVSLYLPNGNPVDTEK
FPYKLSWMKRLQAFAEDRLALEEPLVLAGDYNVIPEPVDCHDPKAWEGDALFRPESRNAF
RQLENLGFTDALRAVNDEAETYTFWDYQAGAWPKNNGIRIDHLMLSPEAANLLKSATVEK
HVRGWEKPSDHVPVAILLAA
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatcgtcacctggaacatcaatggcgtcaaggcgcgtatcgacaatctgcagacc
tggctgaaggaaagcgatcccgacattgcctgcctgcaggaaatcaagtcagtggatgaa
ggctttccccggctggaacttgaagcgctcggctatcacgttgaaacgcatggacaaaag
ggcttcaacggcgtagcgatcctgtccaagaaaagccccgatgaagtcaatcgcggtctt
cccggcgatgacagcgacgagcaggcccggttcatcgaggcggtgttctcgaccgatggc
ggcgtgctgcgtgtggtgtcactgtatcttcccaacggcaacccagtcgacaccgagaag
tttccctacaagctgtcctggatgaagcgtctgcaggcgttcgccgaagaccggctggcg
cttgaggagccactggttcttgccggcgactacaatgtcattcccgagcccgtcgactgc
cacgaccccaaggcttgggagggggacgcactgtttcgtcccgaatcccgcaatgccttc
aggcagcttgagaatctcggctttaccgacgccttgcgggcggtcaatgacgaagcggaa
acctacacgttctgggattatcaggccggcgcctggcccaagaacaacggcatccgcatc
gatcatctgatgctctcgcccgaggcggccaacctgctgaaatcggcaacagtggaaaaa
cacgttcgcggctgggagaaaccttcggatcacgtccccgtggcgatcctgctggcagcc
tga
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