Hoeflea alexandrii: ABWH89_21185
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Entry
ABWH89_21185 CDS
T11168
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
hoax Hoeflea alexandrii
Pathway
hoax02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hoax00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABWH89_21185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hoax02000
]
ABWH89_21185
Transporters [BR:
hoax02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ABWH89_21185
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_22
AAA_16
AAA_29
nSTAND_NTPase5
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
XHC37394
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Position
4423818..4424807
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AA seq
329 aa
AA seq
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MPYAVSFQQVSRHFGTVRAVDAVDLEIEAGEFFAMLGPSGSGKTTCLRLIAGFEQPTSGH
IEIFGETAEGVPPYRRNVNTVFQDYALFPHLNVADNVAYGLMIRGAGKAERTREAEAALE
MVKLPGYGARKPGQLSGGQRQRVALARALVNKPKVLLLDEPLGALDLKLREQMQEELKVL
QKALGITFVFVTHDQGEALSMADRIAVFNEGRIMQTGTPEEIYRRPRTRFVADFVGSSNV
LSPQLTERLAGVAEWSSLRPEDIRLGGESGQDATVTGTSFLGSATRVTLDVSGEKINVLL
PSGAPVPSQGESVRFSWDKNALHLMGAGA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgctgtctcatttcaacaggtctcccgacacttcggaaccgttcgcgctgtc
gacgccgtcgatctggagatcgaagcgggcgagtttttcgccatgctcgggccgtcggga
tcgggcaagacaacatgtctgcggctgattgccggatttgagcagccaacctccgggcat
atcgagatcttcggtgagaccgcagaaggcgttccgccctaccggcgcaacgtcaatacc
gtgttccaggactatgcgctgtttccgcatctcaacgtggccgataatgtcgcctacggg
ctgatgatccgcggcgccggcaaggccgaacgcacccgcgaggctgaagcagccctcgaa
atggtcaagctgcccggttacggcgcgcgcaagcccgggcaattgtcgggcggccagcgg
cagcgcgtggcgttggcacgggccctggtcaacaaaccgaaagtgcttttgttggacgag
ccgctcggcgcgcttgacctcaagctgcgcgaacagatgcaggaagaattgaaggtgctg
caaaaggcgctcggcatcaccttcgtcttcgtcacccacgaccagggcgaagcgctgtcg
atggccgaccggatcgccgtgttcaacgaaggccggatcatgcagaccggcacgcccgaa
gagatctaccgccgccccaggacccgtttcgtcgccgatttcgtcggatcctccaacgtg
ctttcgccgcagctcaccgagcggctcgcgggcgtggcggaatggtcgagcctcaggccc
gaagatatccggcttggaggcgaaagcggacaggacgccaccgttaccggaacgagtttc
cttggcagtgccacccgcgttacgctggatgtttcgggggagaagatcaacgtgctgctg
ccttcgggcgcgccggtgccttcacagggtgaaagcgtccgcttctcttgggacaagaac
gccctgcacctgatgggagccggggcatga
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