Hemiscyllium ocellatum (epaulette shark): 132805507
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Entry
132805507 CDS
T09720
Symbol
itga10
Name
(RefSeq) integrin alpha-10
KO
K06586
integrin alpha 10
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04510
Focal adhesion
hoc04512
ECM-receptor interaction
hoc04810
Regulation of actin cytoskeleton
hoc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132805507 (itga10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132805507 (itga10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132805507 (itga10)
04810 Regulation of actin cytoskeleton
132805507 (itga10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hoc04515
]
132805507 (itga10)
Cell adhesion molecules [BR:
hoc04515
]
Integrins
Integrin alpha subunits
132805507 (itga10)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
FG-GAP_3
Integrin_A_Ig_3
Integrin_alpha
vWA_SIBA-E
EphA2_TM
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
132805507
NCBI-ProteinID:
XP_060676603
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Position
50:complement(820577..919413)
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AA seq
1130 aa
AA seq
DB search
MLLQQRDLLLVSAPRDGIAKSKNGDIYRCNISNKRSSNCMKLNSGEAALKNISDDMKNTH
FGMTLTRNSQGFMVCAPLWSQKCGSSIYNTGICTNISSTFQPSGITAPTAQDCGMSMDIV
ILLDGSNSIYPWYEVQRFLSNVLNKFHIGPKQIQIGVLQYAETVVHEFSLGEHKTAREVV
EAARNISRQGGRETKTAMAVKVACSEAFSPERGGREGATKVMVVVTDGESHDGVELRDAL
AECEKRNISRYAIAVLGHYIRRRKDTETFIKEIKFIASDPDEKHFFNVSDEAALNDIVDA
LGDRIFGLEGTIQQNESSFELEMSQAGFSAHVLEDGVLLGAVGAYDWNGAVVKESAQGNI
ITSREALNREFPKALKNHAAYLGYTVSSVRQRNGQRVYVAGAPRFKHKGKVIFFNLDKGG
NLTIHQALIGEQIGSYFGSEVCPVDVNGDGVTDVLLVAAPMYLGASSKETGKVYIYRVQE
FSLSFSDTLQISNKPQDSRFGFTLIAVPDLNYDAFNDVVVGAPLEDDHRGAVYIYHGHQD
TILPMYKQRIAASAVDLGLWYFGRSADGQMDVDGDGLIDVAVGAFGKAVIFGILRVVQVN
ASVTFSPPFVNMLLRNCQRNDKDVTCVTATACFTTRAKSPGLSNSTLDLYYNIVLDEKKF
APRALFDGSDQRQKEEVIHLLTDGLKCHTHHFHVIDTADYIRPIGFTLQFSLAEQPAGPI
LDDGCVTTVKNWIPFFKDCGDDDECLTDLALQAHLDISGSRQSPYIVKSHRQRVSAIVML
ENRKENAYNTSLNITFSKNLLFTSLLVKDDAQNKVECLVLSPHHRICNVSFPVFRSLMQV
SFRMEFEFHCSHLLDEVELYISVSSDSTELNETLDDNTVYLWTAVQYEADLLLTSSEPTL
QRYEMQQAAESVPEEIRPDFNHTFKIKNLGCFPAEGLEAKIYIPTMINAYYHISSVSTAF
TEPVLGINCSMSNATDQLRGKQDQATEVLSRDFTYVNRLDCSNSWCSIFTCYMNTVDRSE
EVVIHIGYTLYGKFFRTVKFRSLKIVTTLTLDVQTPQVLTIAESARYREVIVELIKPVVI
AVSLWIIIGSTLGGLLLLALIIFILWKCGFFKRKQKEEEDEDKEEDEKKE
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgttgttacagcagcgcgacctgttactggtcagtgccccccgggacggcattgccaag
agtaaaaacggcgacatataccgatgtaacatatcgaataaaaggagctccaactgcatg
aaactaaactctggggaggcagctctgaaaaacatctctgatgatatgaagaacacacac
tttggcatgacactgacccggaactcccaggggttcatggtgtgtgctcccctctggtcg
cagaagtgcggaagttccatctacaatactggtatctgtacaaacatcagctccacattc
cagccgtcgggaatcactgcacccaccgcacaagactgtgggatgtccatggacattgtc
attctgttggatgggtcaaacagtatctacccgtggtacgaggtacagaggttcctcagc
aatgtcctcaacaaattccacattggcccaaagcagatacagattggagtgttgcagtat
gcagagacagtggttcatgagttcagtctgggcgaacacaagactgcgcgggaagtggtg
gaggctgccagaaatatcagtcgccagggcggccgggagaccaagacagcaatggcagtg
aaagtggcctgctctgaggccttcagtccagaacgtggcgggcgagaaggagctacaaaa
gttatggttgttgtgacagatggagaatctcacgatggcgtggagctccgtgacgcactt
gctgagtgtgagaagcgtaacatcagtcgctatgccattgcagttctgggtcattacatc
cggagacgcaaagacacagagacctttataaaggagatcaaatttatcgccagtgaccct
gacgagaaacatttcttcaatgtaagcgatgaggcagcattaaacgatatcgtagatgct
ttgggagacaggatatttgggttagaaggaacaattcagcaaaacgaaagctcgtttgag
ttggaaatgtcacaggcaggattttcagcccatgttctggaggacggggtcttgctcgga
gctgtcggagcgtatgactggaacggggccgtcgtgaaggagagtgcccagggtaacatc
atcacatccagagaggccctgaaccgggagtttcccaaagccttgaagaaccacgcagcc
tacctcggctatacagtgtcgtctgtgaggcagaggaatggtcaacgtgtctatgtggca
ggcgctccgagattcaaacacaaaggcaaggtcatcttcttcaatctggacaaaggtggc
aatctgaccatacaccaggccctgatcggagaacagattggatcgtattttggaagtgag
gtttgcccagtggatgtgaatggtgatggggtgacagacgtgctgttggtcgcagcaccc
atgtaccttggagccagcagcaaggagactgggaaagtctacatttacagagtacaggag
ttttcgctttcattcagcgatactctacagatcagcaacaaaccacaggattcccggttc
gggttcacgctcattgctgttcctgaccttaattacgatgcgtttaatgatgtcgttgtg
ggtgccccattggaggatgatcatcgtggggcagtgtatatttatcatggacatcaagac
accattcttccaatgtataaacagagaattgctgcttcggccgtggacctgggactttgg
tattttggacgcagtgcagatggccagatggatgtggacggagatggattgatcgatgtg
gcagtgggagcttttggcaaggctgtcatttttgggatactgcgtgtggtccaggtgaat
gcctcagttacgttcagtcctcccttcgtcaatatgctcctacggaactgccagagaaat
gacaaagatgtcacctgtgttactgccactgcctgtttcaccacaagagcaaagtcaccc
ggactgagcaacagcaccctggatctgtattataacattgtgttggatgaaaagaagttt
gctcccagagccttgtttgatggaagtgaccagaggcagaaggaggaagttattcatctt
ctgactgatggcctgaaatgtcacacccaccactttcacgtcattgatacagctgactac
attcggcccatcgggttcacactacagtttagtttggctgaacagcctgcggggccaatt
ctggatgacggttgtgtaactacagttaaaaactggattcccttcttcaaagactgtggg
gatgatgatgaatgtctgacggaccttgcgttgcaggcacacttggatatttcaggatct
agacaaagtccttacattgtaaaaagccatcggcagagggtgtcggcaatagtgatgctg
gaaaacaggaaagaaaatgcctacaatacaagcctcaacatcaccttttccaaaaacctg
ctcttcaccagtctccttgtgaaggatgatgcacagaataaggttgaatgtctggtgtta
tcgccacaccacaggatctgcaacgtcagtttcccggtcttcagatctctgatgcaggtc
tcctttcgtatggagtttgagtttcattgttcacacctgttggatgaagtggagctctac
atcagtgttagcagtgacagtacagagctgaatgagacgctggatgataacaccgtgtac
ctgtggacggctgtccagtatgaagcagatctcctcctcaccagcagtgaacccactctc
cagcgttatgagatgcagcaggcagcagagtcagtacctgaagaaatccgtccagacttt
aaccacaccttcaagatcaaaaacttgggctgctttcctgctgaaggtttggaagctaaa
atctacattccgaccatgatcaacgcgtactatcacatttcatcagtgagcactgccttt
accgagccagtcctgggaataaattgctccatgagcaatgctacagatcaactgagggga
aaacaagaccaagccacagaggtcctcagcagggatttcacatacgtgaaccgcctggac
tgcagtaattcctggtgcagcattttcacctgctatatgaatactgtagacaggagtgag
gaggtggtaatccacattggctacacactgtatggcaaattcttcaggacagtaaagttc
agatcattgaaaattgtcactacgctaactctggatgtacaaactcctcaggttctgaca
attgcagagtcagctcgctatcgagaggtgatcgtagagctgatcaagccagtggtgatt
gctgtgtctctgtggattatcattggcagcacactcggaggacttctgctgctggctctc
atcatcttcattctgtggaagtgtggattctttaagagaaaacaaaaggaggaagaagat
gaggacaaggaggaggatgagaagaaagagtga
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