Hemiscyllium ocellatum (epaulette shark): 132805574
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Entry
132805574 CDS
T09720
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132805574 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hoc03041
]
132805574 (prpf3)
Spliceosome [BR:
hoc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
132805574 (prpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
132805574
NCBI-ProteinID:
XP_060676686
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All DBs
Position
50:3399573..3426602
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AA seq
684 aa
AA seq
DB search
MSLSKRDLDELKPWVEKTVKRVLGFSEQTVVTAALNCVGKGMDKKKTVEHLKPFLDDSTV
RFVDKLFEAVEEGRNTRHSKSGGEKHRKRELKEVFGEDSEVTRESSSKRKRILRFEEVEE
NDIIPGPPTESPGMLTKIQIKQMMEAATKQIEERKRQLSLITPSFQQRVSALAPNADLPP
MGQTIQPSQAASFMNDAIEKAKKAAELQARIQTQLSLKPGLLQSTNLVGLANLHAMGIAP
PKVELKEHLKPTPLILDDQGRTVDATGKEVELTHRMPTLKANIRAVKREQFKQLLLREKP
SDDLEANTFYDPRVPVLPSQRQKRIFRFHERGKFEKIAQRIRTKAQLEKLQTEIAQAAKK
TGIQTSTKLALIAPKKELREGEVPEIEWWDSYIIQSGIELTAENLKNEQNFHGITNLVEH
PTQISPPVDTDKPVTLGVYLTKKEQKKLRRQTRREGLKEMQEKIRLGLMPPPEPKVRISN
LMRVLGTEAVQDPTKVEAHVRAQMAKRLKAHQDANSARKLTADQRREKKIKNLKEDVSQG
VHIAVYRIRNLSNSAKKFKVETNAGQLYLTGTVVLHKDVNVVVVEGGPKAQKKFKRLMLH
RIKWAEQTATSRDDDEDGSDDEVVKKVNKCVLVWEGTAKERSFGDMKFKQCPTESMAREH
FKKHGVEQYWDLAISESVLEVTED
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgtccaaacgtgacctggatgagctgaagccatgggtggagaagacagtaaag
agggtcctgggcttctccgagcagaccgtggttacggcagcactcaactgcgtgggcaaa
gggatggacaaaaagaaaacagtggagcacctgaaaccgtttctggacgactcgacggtg
cggtttgtggacaagctgttcgaggcggtggaggaaggccgcaacacccggcactccaaa
tccggtggggagaaacaccggaaaagggagctaaaggaggtctttggcgaggattcggag
gtcactcgggaatcgtcgtccaagaggaaacggatcctgaggttcgaagaggttgaggag
aatgacattatccccggaccacccacagagagcccaggcatgctcacaaagattcagatc
aaacagatgatggaagcggcgacaaagcagattgaggagaggaagcggcagctcagtctg
atcaccccatcgttccagcagcgggtttcggccctggctcccaacgccgacctgcccccg
atgggtcagaccatccagccctcccaggcggcctccttcatgaacgatgccattgagaag
gccaagaaggcggccgagctgcaggcccggatccagacccagctctccttgaagcccgga
ctgctgcagagcaccaacctggtgggcctcgccaatctgcacgccatgggcatcgcgccc
cccaaagtggagttgaaggagcacctgaagccgacaccgctgatactggacgaccagggc
cggacggtggacgccactgggaaggaggtggagctgacccaccggatgcccaccctgaaa
gctaacatccgagcggtgaagcgcgagcagttcaagcagctgctgctgagggagaaaccc
agcgacgacctggaggccaacaccttctacgacccccgcgtgcccgtgctgccctcccag
cgccagaagaggatcttccgtttccacgagaggggcaagtttgagaaaatagcccagagg
atacgcaccaaggcgcagctggagaaactgcagaccgaaatcgcccaggcggccaagaag
acgggcatccagacctcgaccaagttggcactgatcgcccccaagaaggagctgagggag
ggcgaggtgccggaaatcgagtggtgggattcctacatcattcagagcgggattgagctg
acggcggagaatctgaagaatgaacagaacttccacggcattacaaacttggtggagcat
ccgactcaaatcagccctcccgttgacacagacaagccggtcacactcggtgtttacctg
accaagaaggagcagaagaagctacgacgacagactcgacgagagggcctgaaggagatg
caggagaagatacgcctggggctcatgcctcctcctgagccaaaggtgcggatctccaac
ctgatgcgggttctcgggacggaagctgtgcaggatccaaccaaggtggaggctcacgtc
agggcacagatggccaagaggttaaaggctcatcaggatgccaacagtgcccgcaaactg
acagctgaccagcggagagagaagaagatcaagaatctgaaggaagacgtgtcccagggc
gtccacatcgcagtctaccgaatccgaaacctgagcaactcggcgaagaagttcaaagtg
gaaaccaatgcgggacagctgtacctgacgggaacggtggtcctgcacaaagatgttaac
gtggtggtggtagagggaggtcctaaagcacagaagaaattcaagcgtctgatgctacat
cgtataaagtgggctgagcagactgccacttcccgagacgacgacgaagacggatcagac
gatgaggttgtgaagaaggtgaacaagtgtgtgctggtgtgggaggggacggcgaaggag
aggagttttggcgacatgaaattcaaacagtgtccgacagagagcatggcacgggagcat
ttcaagaaacacggagtggaacagtactgggacctggccatcagtgaatcggtgctggag
gttacagaggactga
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