Hemiscyllium ocellatum (epaulette shark): 132805629
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Entry
132805629 CDS
T09720
Name
(RefSeq) nuclear receptor ROR-alpha A-like
KO
K08532
RAR-related orphan receptor alpha
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hoc03000
]
132805629
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
hoc03310
]
132805629
Transcription factors [BR:
hoc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
132805629
Nuclear receptors [BR:
hoc03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
132805629
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
YcbB
Motif
Other DBs
NCBI-GeneID:
132805629
NCBI-ProteinID:
XP_060676793
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Position
50:5905199..5941354
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AA seq
453 aa
AA seq
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MRAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNSITYTCSRQQNCPIDRTSRN
RCQHCRLHKCLELGMSRDAVKFGRMSKKQRDSLHAEVQKHQMQQQGAGKPQAEVQAYALA
SETQGLPKPGQEAYPSGHSLGTGRQAAGGQGYSSSEAGSPPGQPGLPANDVKHRPFVQHP
GGGEFVVWPGFARLHGPLPTTRELDHIIQNVVKSHRETRQYVPEQLHTLRWKLFSQSEVD
SYQRKSAEEMWQRCARNITEAIQYVVEFAKRIAGFLELCQNDQIVLLKAGSLEVVLLRMC
QAFNPSNNTVFFEGKYAGTELFHALGCEDLTNSIFEFSRGMCSLRLSEQELALFTATVLI
SSDRMWLQERYKVERMQADLQLALKSVLQRNRHDPILAKLPVKVLSLRSLCGRHAEKLKD
FRLAHPLVAHTLFPPLYNELFIMDSEHSATFDL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcagatcgaaatcattccgtgtaaaatctgcggagacaaatcgtccgggatc
cattacggagtcataacttgtgaagggtgcaaggggttcttcaggagaagccaacagaac
agcatcacctacacctgctcccgccagcagaactgccccatcgaccggaccagccgcaac
cgatgccagcattgccggttgcacaagtgccttgagttgggcatgtcccgggatgcggtc
aagttcgggcgtatgtcaaagaaacagagggacagcctacacgctgaggttcagaagcac
cagatgcagcagcaaggtgcaggcaagccccaggctgaggttcaggcctacgctctggct
tcagagacccagggcctaccaaagcccggccaggaggcctatccctctgggcacagcctc
gggacaggcaggcaggctgctggagggcagggctacagctcctcggaagcaggctcaccc
ccgggtcagccgggcctaccggccaatgacgtgaagcaccggccgttcgtacagcacccg
ggcggaggggagtttgtggtgtggccaggtttcgcccgactccacggtcctctgcccacg
accagggagctggaccacatcatccagaacgtcgtgaaatctcaccgtgagacacgccag
tatgtgccagagcagctccacactctccgctggaagttattctctcagagtgaagttgac
agctaccagagaaagtcggccgaggagatgtggcagaggtgcgcccggaatatcaccgag
gccatccagtacgtggtggagttcgccaaacgcattgccggcttcctggagctgtgccag
aacgaccagatcgtgcttctcaaagcaggctccctcgaggtggttctcctgcggatgtgc
caggcctttaatcccagcaacaacacggtcttctttgaaggaaagtatgcagggaccgag
ctcttccacgctctgggctgtgaagatttgaccaactcgatatttgagttctcgcgagga
atgtgctccctgcgtctctcggagcaggagctggctttgttcactgccacagtcctcata
tcctctgaccgcatgtggctccaggagaggtacaaggtggagaggatgcaggctgacctc
cagctggccctgaagagcgtcctgcagaggaaccgccatgaccccatcctggccaagctg
ccagtgaaagtgctctccctgcgaagcctgtgcgggcgccatgccgaaaagctgaaggac
ttccgtctcgcccaccccttggtcgcccacacgctgttcccccctctctacaacgaactc
ttcatcatggactccgagcacagcgccacctttgatctgtga
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