Hemiscyllium ocellatum (epaulette shark): 132807649
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Entry
132807649 CDS
T09720
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132807649 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132807649 (apex1)
Enzymes [BR:
hoc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
132807649 (apex1)
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
132807649 (apex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
132807649
NCBI-ProteinID:
XP_060677684
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All DBs
Position
27
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AA seq
256 aa
AA seq
DB search
MCVKGNQESIKLEEEAYKVTKWVISESPDVLCLQETKCNEKQVPAEVRTLPAFPHQYWHS
PQDKEGYSGVGMLCKVKPLNVTFGIGVEQHDTEGRVITAEFDKYFLVTAYVPNSGKGLVR
LEYRQGWDVDFRAYLQGLASRKPVVLCGDLNVAHQEIDLRNPKTNKKTAGFTAQEREGFS
QLLSQGFLDTYRHLQPDTPHAYTFWTYLGNCRPRNVGWRLDYFVMSQALLPHLCDSKIRS
GALGSDHCPITLLMAM
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtcaaaggaaatcaagagtctatcaaattggaagaggaggcatacaaagtgaca
aagtgggtcatctccgagagccccgacgtactgtgtctccaggagactaagtgcaacgag
aagcaggtgcccgctgaagtccggacactgcccgccttccctcaccagtactggcactcg
cctcaggacaaggagggctacagcggcgtgggcatgctgtgtaaggtcaaacccctgaac
gtcaccttcggcatcggtgtggaacagcatgacactgagggccgagtgatcaccgccgag
tttgacaagtacttcctggtgactgcctacgtgccgaattcggggaagggcctggtgcgg
ctggaataccgtcaggggtgggatgtggatttccgggcctacctgcagggcctggccagc
cggaagccggtggtcctgtgcggggacctgaacgtggctcaccaggagatcgacctgagg
aacccgaagaccaacaagaagacggccgggttcaccgcgcaggaacgggagggcttcagc
cagctcctgtcccagggcttcctggacacctaccgtcacctgcagccggacacccctcat
gcctacaccttctggacctacctgggcaactgccggccccgcaacgtgggctggaggctg
gattatttcgtcatgtcccaggcgctgctccctcacctgtgtgacagcaagatcaggtct
ggggccctgggttcggaccactgccccatcaccctgctgatggccatgtga
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