Hemiscyllium ocellatum (epaulette shark): 132807975
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Entry
132807975 CDS
T09720
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04137
Mitophagy - animal
hoc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132807975 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
132807975 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132807975 (vcp)
03009 Ribosome biogenesis [BR:
hoc03009
]
132807975 (vcp)
04131 Membrane trafficking [BR:
hoc04131
]
132807975 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hoc04147
]
132807975 (vcp)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
132807975 (vcp)
Ribosome biogenesis [BR:
hoc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
132807975 (vcp)
Membrane trafficking [BR:
hoc04131
]
SNARE
SNARE associated proteins
Others
132807975 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
132807975 (vcp)
Exosome [BR:
hoc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132807975 (vcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
RNA_helicase
NPHP3_N
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_7
AAA_18
ATPase
DUF815
ABC_tran
AAA_24
TsaE
NB-ARC
ResIII
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
132807975
NCBI-ProteinID:
XP_060677876
LinkDB
All DBs
Position
1:complement(68231839..68301622)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKSDDLSTAILKQKHRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDIVSIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDVIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWDDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRGAILKAN
LRKSPIAKEVDLEYLAKTTNGFSGADLTEICQRACKLAIRESIESEIRRERERQGNPSAM
EVEEDDPVPEIRKDHFEEAMRYARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSSQAG
AGPSQGTGGGSGGNMFSEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggaggagagtccaaatctgatgacttgtcaactgctattttgaagcagaag
catagacccaatcgactaattgttgatgaagcaattaatgaagataacagtgtggtttca
ctctctcaggcaaagatggatgaattgcagcttttcagaggtgatacagtattgctgaaa
ggaaagaagagacgagaaacagtttgtattgttctatcagatgatacgtgttctgatgag
aaggttcgcatgaacagggttgtgcgcaacaacctgagagtgagattgggtgacattgtg
agcattcaaccatgcccagatgtaaagtatggcaaacggatccatgtactacccattgat
gacacagttgagggcattactggaaatttatttgaagtttatctcaaaccatatttcctg
gaggcttatcgaccaatcaggaaaggtgatatctttctggtccgtggtggaatgcgggct
gtggaattcaaagtggtggaaactgatccaagcccatactgtatagttgctccagacaca
gtcattcactgtgagggtgaacccatcaaacgagaggatgaggaagaatctttaaatgaa
gttggttatgatgatattggtggatgcagaaagcagcttgctcagatcaaagagatggtg
gagctgcctctccgtcatcctgcccttttcaaagcaattggtgtcaagccaccacgtggt
atcctgttgtatggcccccctggtactggcaagactctgatagcacgtgctgttgcaaat
gaaactggcgcgtttttcttccttatcaatggacctgagatcatgagcaaacttgcagga
gaatctgagagcaatctgagaaaagcatttgaagaggctgagaaaaatgctcctgcaata
atttttattgatgaattggatgccattgctccaaagagagagaagactcatggcgaagtg
gaacgtcgtattgtgtcacagttgctcactttgatggatggtttgaaacagcgggctcat
gtcattgttatggcagctacaaatcgaccaaacagcattgatcctgcccttagacggttt
ggccgatttgacagagaagtggatattggcattcctgatgctacaggtcgactggaaatc
ctacagattcacacaaagaacatgaagttggcagatgatgtagaccttgaacaggttgct
aatgaaactcacgggcatgttggtgctgacctggccgccttatgttctgaagctgctctt
caggctattcggaaaaagatggatgttattgatctggaagatgaaaccattgatgctgaa
gttatgaattcacttgcggttaccatggatgatttcaggtgggcattgagccagagcaat
ccatcagcactacgtgagactgtggttgaggtgcctcaggtaacgtgggatgacattggt
ggactggaggatgtgaaaagggagctccaagaacttgtacaatatcctgtggaacatcca
gacaaatttctgaaatttggcatgaccccttcgaagggtgtactattctatgggccacct
ggctgtggtaaaactttgctggcaaaagccattgcaaatgaatgccaggctaactttatc
tcaatcaagggaccagagctgcttactatgtggtttggagaatctgaggccaacgtccga
gaaatctttgataaggcccgtcaagctgccccctgtgtgctgttctttgatgaacttgat
tccattgctaaggctcgtggtggcaacattggtgatggtggtggtgctgctgatcgtgtt
ataaatcagatcctgactgaaatggatggcatgtccaccaaaaagaatgtctttatcatt
ggtgcaactaaccgccctgatattatcgatcctgcaattttgcgtcctggacgccttgac
caactgatttacattccactgcctgatgaaaaatctcgtggtgctattttgaaggctaac
ttgaggaagtctcctattgctaaggaagttgacttggagtatttggctaagaccaccaat
ggattttctggagctgatttgactgaaatctgtcagcgagcctgtaaacttgcaatcaga
gaatcgattgaaagtgaaatcagacgagaacgtgaaagacaaggcaatccttcagccatg
gaggttgaagaagatgatccagttcctgagatacgaaaggaccattttgaggaagctatg
cgctatgcacgccgatctgtcagtgataatgatattcgaaaatatgaaatgtttgcacaa
acactgcagcagagtcgtggatttggcagtttcagattcccatctagtagtcaagctggt
gcaggaccaagccaaggaactggaggaggaagtggtggaaacatgttcagtgaagacaat
gatgatgatctgtatggttaa
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