KEGG   Hemiscyllium ocellatum (epaulette shark): 132808050
Entry
132808050         CDS       T09720                                 
Symbol
sf3b6
Name
(RefSeq) splicing factor 3B subunit 6
  KO
K12833  pre-mRNA branch site protein p14
Organism
hoc  Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hoc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132808050 (sf3b6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hoc03041]
    132808050 (sf3b6)
Spliceosome [BR:hoc03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    132808050 (sf3b6)
 Complex B
    132808050 (sf3b6)
 Complex C
   U2 SnRNP specific factors
    132808050 (sf3b6)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 132808050
NCBI-ProteinID: XP_060677947
LinkDB
Position
3:complement(134829194..134842328)
AA seq 124 aa
MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTA
YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKILKEKYGIN
TETK
NT seq 375 nt   +upstreamnt  +downstreamnt
atggcgatgcaagcggcgaaacgggcgaacattcgtttgcctccagaagtaaatcgtatc
ttgtatataagaaatttgccatacaaaataacagcagaagaaatgtacgatatatttggg
aaatatggaccaatccgacagatcagagtaggaaacacacctgagacgaggggaactgca
tacgtagtgtacgaagatatttttgatgccaagaatgcttgtgaccacttatctgggttc
aatgtgtgcaacagataccttgtagttttgtattacaatgcaaacagggctttccaaaaa
atggatacaaagaaaaaggaagagcaacttaaaattctcaaggagaagtatggaatcaac
actgaaacaaaatga

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