Hemiscyllium ocellatum (epaulette shark): 132810747
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Entry
132810747 CDS
T09720
Symbol
arfgef1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132810747 (arfgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hoc04131
]
132810747 (arfgef1)
Membrane trafficking [BR:
hoc04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
132810747 (arfgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
132810747
NCBI-ProteinID:
XP_060678674
LinkDB
All DBs
Position
4:complement(7380076..7572533)
Genome browser
AA seq
1897 aa
AA seq
DB search
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKSETEKQSPPHSEGKA
VSGTLPPVKSKANFIEADKYFLPFELACQSKCPRIVSTSLDCLQKLIAYGHLTGNAPDNT
TPGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALQEVKQMEKERLRQQHHLQQPNVNQYE
PESPQLGRLEEQPILEVAQVPQLDSGHNDEVDKHTQEDTEPENGIDICNTENEQTEVDQA
TAAKSFAKGNAGRSDGEGLEFEDNVHEIVQNILQELVTTVVGGPLPTTHLGGWDDVGCGP
PHYHPQCCCDWPIKSAIEGEKSGGNGSPESATGPLEDETVAVNDTDNVHSNGIPGTPISV
SYTPSLTDDRLSVSSSDTQECGITPGGGSSAKFSHILQKDAFLVFRSLCKLSMKPLSDGP
PDPKSHELRSKILSLQLLLSILQNAGPIFRTNEMFINAIKQYLCVALSKNGVSSVPEVFE
LSLSIFLTLLSNFKTHLKMQIEVFFKEIFLYILETSTSSFDHKWMVIQTLTRICADAQSV
VDIYVNYDCDLNAANIFERLVNDLSKIAQGRGGHELGMTPVQELSLRKKGLECLVSILKC
MVEWSKDLYVNPNSQTSLGQEKTSEQDNNENKYPDTINRYGSINSLDSTASSGIGSYSTQ
TSGADNPEQYEVLKQQKEIIEQGIELFNKKPKRGLQYLQEQGMLGTTPDDIAQFLHQEER
LDTTQVGEYVGDNDKFNKEVMYAYVDQLDFSSKDFVSALRMFLEGFRLPGEAQKIDRLME
KFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHSSQVKNKMTKDQYIKMNRGINDS
KDLPEEYLSAIYDEIAGKKISMKETKELAIKSSKQNVASEKQRRLLYNLEMEQMAKTAKA
LMEAVSHVQAPFTSATHLDHVRPMFKLAWTPFLAAFSVGLQDCDDTEVAFLCLEGIRCAI
RTACIFNIQLERDAYVQALARFTLLTASSGITEMKQKNIDTIKTLITVAHTDGNYLGTSW
HEILKCISQLELAQLIGTGVKARYISGTVRGREGSVSGSRDQTADEFLSLGLGTLVSGTV
DRKQIASIQESIGETSSQSVVVAVDRIFTGSTRLDGNAIVDFVRWLCAVSMDELASPTHP
RMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKF
LEKGELANFRFQKDFLRPFEHIMKKNRSPTIRDMVVRCIAQMVNSQAGNIRSGWKNIFSV
FHLAASDQDESIVELAFQTTGHIVMNVFAKYFPATIDSFQDAVKCLSEFACNAAFPDTSM
EAIRLIRHCAKYVSERPQAFKEYTSDDMNVAAEDRVWVRGWFPILFELSCIINRCKLDVR
TRGLTVMFEIMKTYGHTFEKHWWQDLFRIVFRIFDNMKLPEQQTEKAEWMTTTCNHALYA
ICDVFTQYFEVLNDILLDDIFAQLYWCVQQDNEQLARSGTNCLENVVILNGEKFLPETWD
KTCNCMLDIFKTTIPHALLSWRPSHSESDSSLQADPGEKQLDAISQKSVDILSKGDDQQS
VTSAERNPSDWRQSQFSLVSNTSDDAAKAKTPTKLSEQKLFAALLIKCVVQLELIQTIDN
IVFFPATSKKEDAENLAAAQRDAVNTDVHVEKQDQGMYRYLTSKQLFKLLDCLLESHRFA
KSFNSNNEQRTALWKAGFKGKSKPNLLKQETSSVACGLRILFRMYTDKNRRDAWVEVQQR
LLNVCSEALSYFLTLTSESHREAWTNLLLLFLTKVLKINDERFKAHASKYYPLLCEIMQF
NLIPELRAVLRKFYLRIGVVFKISHPSDQEHGPIKLQ
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaagggaaaaagacgaagaacatgtttctgactcgggcacttgagaagattttg
gccgataaggaggtgaagaaggcgcaccactctcagctgaggaaagcctgtgaggtggca
ctggaggagataaaatcagaaactgagaaacaaagtcctccccattcagaaggaaaggct
gtttctgggaccttgcctccagtcaaatccaaggcaaactttattgaagcagacaaatat
tttctccctttcgagttggcatgtcagtcgaaatgtccccgcatagtcagcacgtctctt
gactgtttacagaaattaattgcttatggacatctcactggcaatgccccagacaataca
acacctggcaagaaattaattgatagaatcatagagacaatatgtggctgttttcaaggc
ccacaaacagatgaaggtgttcagctacagataattaaggctttattaactgcagtaaca
tctcaacatatagaaatacatgaaggaactgtgttgcaggctgttagaacatgctacaat
atttacctggccagcaaaaacttaataaaccaaaccacagccaaggcaacactaactcag
atgttgaatgttatatttgcacgaatggaaaaccaagcactgcaggaagtaaaacaaatg
gaaaaggagagacttcggcaacagcaccatctccagcaacctaatgtgaaccagtatgaa
cctgaatcaccacaactgggtcgtcttgaggagcagcctattcttgaggtggcacaggtg
cctcaactagattcaggccacaacgatgaagtggacaagcatactcaagaggatacagag
ccagaaaatggaattgacatttgtaacacagaaaatgagcaaacagaagttgaccaggcc
acagcagctaaaagttttgcaaaagggaatgcaggcagaagtgatggggagggtcttgaa
tttgaggataatgtacatgaaattgtacagaacattctacaagagttggtgaccactgtt
gttggaggacctctccctaccacacatctgggaggatgggacgatgtgggctgtggacct
ccccactaccatcctcaatgctgctgtgattggcctataaaaagtgcaattgaaggagag
aagtcaggtgggaatggttctcctgaaagtgctactggtcccctagaagatgaaactgtg
gcagtgaatgacacagacaatgttcattctaatggaattccagggactccaatctccgtg
tcatataccccatcattgactgacgacagattgtcagtttcgtccagcgacactcaggaa
tgtggaatcactccaggaggtggttccagtgcgaagttctctcacattctgcagaaggat
gcttttctggtctttcgatcattatgcaaactttccatgaagccactttctgatggtcct
cctgatccaaagtctcacgaattacgctccaagatcctttcactacagcttcttctatca
attctgcaaaatgccggaccaatttttcgaactaatgaaatgttcatcaatgcaataaaa
cagtacctttgtgtggctttatcaaaaaatggtgtctcttcagtgccagaagtgtttgaa
ttgtcactttccatctttctcactcttttatcaaacttcaagactcatcttaagatgcag
atagaggtattcttcaaggaaatctttctttatattttggaaacatcgacaagttctttt
gatcacaaatggatggtaattcagactctgaccaggatctgtgcagatgcgcaaagtgtg
gttgacatttatgtaaattacgattgcgacttgaatgctgctaacatctttgaaagattg
gtgaatgacttgtctaagatagcccaaggtcgaggtggtcatgagctgggaatgacacct
gtgcaggagctcagtcttaggaagaagggcttggagtgtttggtctcaattttgaagtgt
atggtggaatggagtaaggatctatacgtgaatccaaactctcagactagccttggccaa
gaaaagacttcagaacaagacaacaatgaaaataagtaccctgacacaataaatcgatat
gggagcatcaattccttggattccacagcatcttcagggattggcagctatagcactcag
acatctggcgcagacaacccagaacaatatgaggttttgaagcagcagaaagaaatcata
gaacaaggaattgaactatttaacaagaaaccaaaaagagggctacagtatctgcaggag
caaggaatgcttgggactacacctgatgatattgctcaatttctacatcaagaagaacga
ttagacacaactcaagtgggtgaatatgtaggagacaatgacaagtttaataaggaggtt
atgtatgcctatgtggaccagttggacttttcatcaaaggattttgtctcagctctccgt
atgtttctggagggattccgtcttccaggagaagctcagaaaattgatcgattaatggaa
aaatttgcagccagatatctggagtgtaaccaaggacaaacgctttttgccagcgcagat
acagcatatgttttggcatattctatcataatgctgacaacagatcttcacagctcacag
gttaagaataaaatgacaaaagaccagtatattaagatgaatagaggaatcaatgacagc
aaagatctacctgaagaatatctatcagctatttatgatgaaatagcaggaaagaaaatt
tcaatgaaggagacgaaagagcttgcaatcaagtcctccaaacagaatgtagccagtgag
aaacagcgaagacttctctataacctggagatggagcaaatggcaaaaactgccaaagcc
ctcatggaggctgtaagccatgtgcaggcaccttttaccagtgctacacacttggatcat
gttaggccaatgtttaaattggcttggacaccatttctggcagctttcagtgtcgggtta
caagattgtgatgatacagaggtggctttcctttgcctggagggcatacgatgtgctatc
cggactgcgtgtatcttcaatattcagcttgaaagagatgcctatgtgcaggctctggca
cggtttactttgttaacggccagttctggcattactgaaatgaagcagaagaacatagat
acaatcaaaacactcatcacagtggctcacacagatgggaactaccttgggacctcctgg
catgagatcttaaaatgcatcagtcagctggaactggcccagttaatagggactggagta
aaagcacgttatatttctggaacagttcgaggtcgagaaggatcagtttctggatccaga
gaccagacagctgacgaatttttaagtttgggactgggtactctagtcagtgggactgtg
gaccgaaaacaaatagccagcatccaggaatctattggtgagacaagctctcagagtgtt
gttgttgcagttgacagaattttcacaggatctacaagacttgacggaaatgctattgtt
gattttgtacgctggctttgtgctgtttccatggatgagttagcctcaccaacacatccg
cgaatgttcagtctacagaagattgttgagatatcttattacaacatggggcgaataagg
ctacaatggtccagaatatgggaggtcattggagaccatttcaataaggttggctgcaat
cccaatgaagatgttgccatttttgcagtagattctctgaggcagttatcaatgaaattc
ttagagaaaggcgaacttgctaacttcaggtttcagaaggatttcttgagaccatttgag
cacataatgaaaaagaacagatcgccaacaatccgtgatatggtggttcggtgtatagct
cagatggttaactcgcaggctggcaatattcgttctgggtggaagaacatcttctctgtc
tttcacctggccgcttccgatcaagatgagagtatagtagaactagcatttcaaaccaca
gggcacattgtcatgaatgtatttgcaaagtattttccagcaacaatagattcttttcaa
gatgctgtgaaatgtttgtcggaatttgcctgcaatgctgcttttcctgatacaagtatg
gaagcaatccgcctcattcgtcattgtgcaaaatatgtctctgagagaccacaggcattc
aaagaatacaccagtgatgatatgaatgtagctgctgaggatagagtatgggtgcgagga
tggtttccaattctgtttgagttgtcatgcataattaacagatgcaaattggatgtaaga
actcggggattaactgtgatgtttgaaataatgaaaacttatggtcatacttttgagaag
cactggtggcaagatctctttaggattgttttcaggatctttgacaatatgaaacttcca
gaacagcagactgagaaagctgaatggatgacgaccacttgtaaccatgcactttatgct
atttgtgatgtattcacacagtactttgaagtacttaatgatatcctcttggatgatata
tttgcacaattatattggtgtgtacagcaagataatgaacagctggctcgatctggtact
aattgtctggagaatgttgtcattctgaatggggagaagtttttgccagaaacttgggac
aaaacttgcaactgtatgttggacatcttcaagactacaattcctcatgcattattatca
tggcgaccctctcactctgaaagtgattcttctttgcaagctgatcctggagaaaaacag
ttggatgccatttctcaaaagtcagttgacattctgagtaaaggtgatgaccaacagtct
gtcaccagtgcagagaggaacccttcagactggcgtcagagccagtttagtctggtatcc
aataccagtgatgatgctgctaaagctaagacaccaacaaaactgtcagagcagaagttg
tttgctgcactcctcattaaatgtgttgtccaactcgagttaattcagacaatcgataac
attgtgttctttcctgcaaccagcaaaaaggaggatgctgagaacttggctgcagctcag
agggatgcagtcaatactgatgtgcatgttgaaaaacaagaccagggaatgtatcgctac
ctaacttcaaagcagcttttcaagctgctggactgcctactcgagtctcatcgatttgcc
aagtcctttaattctaacaatgaacagaggactgcactatggaaagcagggttcaaaggt
aaatcaaagcctaatcttttgaagcaagaaaccagtagtgttgcttgcggcctgcgtatt
ttattccgaatgtacacagataaaaaccggcgtgatgcctgggtggaagttcagcagcga
ttactaaatgtttgcagtgaagctctcagctacttcctgacactgacctcagaaagtcac
cgggaggcctggaccaatctactgctactttttttaactaaagtcctcaaaataaatgat
gaaaggttcaaggcccatgcatcaaagtactacccccttttgtgtgaaattatgcaattt
aatctgattccagaattgagagctgttctacgcaaattttatctccgcattggtgtggtc
tttaaaatatctcatccttcagaccaagagcatggacccatcaagctgcaatga
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integrated database retrieval system
