KEGG   Hemiscyllium ocellatum (epaulette shark): 132810751
Entry
132810751         CDS       T09720                                 
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
hoc  Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:hoc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    132810751 (thoc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hoc03019]
    132810751 (thoc6)
   03041 Spliceosome [BR:hoc03041]
    132810751 (thoc6)
Messenger RNA biogenesis [BR:hoc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     132810751 (thoc6)
Spliceosome [BR:hoc03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    132810751 (thoc6)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd NBCH_WD40 EIF3I Beta-prop_EML_2 Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_IP5PC_F Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_Vps41 WD40_RFWD3 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_NUP159_NUP214 WD40_like Beta-prop_BBS7 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 132810751
NCBI-ProteinID: XP_060678681
LinkDB
Position
Unknown
AA seq 328 aa
MAAPMVETQRKLECLHMTIFSQSFSPCGRYLAAGNNYGEVGIFSLASALSMDATEENQKP
VFTFQAHDGPVYSLVSTSRQLISSGTGDVKGWNWNELIKKGCKEAWSRRPAFGTRLDIPE
INSLILNHKDNTLLMACGDNSVQVMDLENGVFTQTLRGHKDYVHCLALRDQHRECVSGSE
DGTVRLWDLRTAAEVDVIEVYKYEECTRPLHGKWIGCLSTDSNWLVCGGGPALSLWHLRS
VTPTTVYPLPGNQHQVMFYQDLRLAHPLRNVHLEGRGTAETLGTLPSLELHCTGASWFRQ
QHRFKMAAHHLLARRLAGGGAEWIKQSN
NT seq 987 nt   +upstreamnt  +downstreamnt
atggcggcgcccatggtggagacccagaggaagttggagtgtctacacatgaccatcttc
tcccagagtttctctccctgcgggaggtacctggcagctggaaataactatggcgaggtc
ggcatcttcagcctcgcatccgccctcagcatggacgccactgaggaaaaccagaaaccg
gtatttaccttccaagcccacgatggtcctgtctacagcctggtatccaccagtcggcaa
ctcatcagctctggcactggagacgttaaaggatggaattggaatgaactcatcaaaaag
ggatgcaaagaggcttggagtcgtcgacctgcatttgggacccgtttggacattcccgaa
attaacagtctcatcctgaaccataaggacaatactctgctgatggcctgtggggataac
tctgttcaggtgatggatctggagaatggcgtcttcacgcaaacactccggggccataag
gactacgttcactgcctcgctctgagggaccagcacagggagtgtgtctccgggagtgag
gatggcacggttcggctgtgggatctccgcacagcagctgaggttgacgtgattgaggtg
tacaagtatgaggaatgcaccagacccctccatggcaagtggatcggatgcctcagcacg
gattccaattggctggtgtgtggcgggggtcctgccctctctctctggcacctccgctct
gtcacccccaccacggtgtacccgctgccaggtaaccagcaccaggtgatgttctaccag
gatctgcgcctagcacaccccctcaggaacgtccacctggaaggtcgagggacagccgag
acgctgggaacgctgccgtcgctggagctccactgcacaggtgcatcgtggttccgccaa
cagcaccgattcaagatggcggctcaccaccttctcgcgaggagattggcgggagggggc
gctgagtggataaaacaatcgaattga

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