Hemiscyllium ocellatum (epaulette shark): 132812138
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Entry
132812138 CDS
T09720
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03430
Mismatch repair
hoc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
132812138 (mlh1)
03460 Fanconi anemia pathway
132812138 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132812138 (mlh1)
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
132812138 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
132812138
NCBI-ProteinID:
XP_060678879
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Position
4:34032550..34090364
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AA seq
747 aa
AA seq
DB search
MVTPGVIRRLEETVVNRIAAGEVIQRPANAIKEMVENSLDAKSTSIQVTVKDGGLKLIQI
QDNGTGIRKEDLEILCERFTTSKLQKFEDLASIATYGFRGEALASISHVAHVTVTTKTAD
GKCAFRANYCDGRLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSDEYSRIVEVMS
RYAIHNSGVSFAVKKQGETVADVRTLPNASTLDNIRTIFGNAVSRELIEVCFEDPKFAFT
MKGYISNANYSVKKCIFLLFINHRLVESTALRKAIETVYAAYLPKNTHPFLYLSLEILPQ
NVDVNVHPTKHEVHFLHEDSIIESVQQHIESKLLGSNSSRTYFTQTLLPGPTITSNDFIK
PSVASATLPSSSDKPYAHQMVRTDSKEQKIDAFLQPINKPQEALPTTVSVDGGTECQDSE
MEDLSDIDLLAAEKAGSSSMSIQKPLRPCNDDPSSAPARKRSRVDSPGEIKEANSSHEMT
AAHLPKRRIINLTSVLTLQGEISSQNHAGLQDMLQNHSFVGCVNPQWALVQYQTKLYLIN
TTKLSQELFYQILIYDFGNFGVLKLSSPAPLYELAMLALDSPESGWTEEDGPKEGLAEYI
VDFLKTKSEMLQDYFSLGIDEEGNLTGLPLLLENYVPALEGLPMFILRLATEVNWDEEKE
CFEKLSKECGMFYSIRKEYTLDTESQVSPNPSQQQEFGSDKPWKWTIEHVVSKAFRTLLL
PPKHFAEDGSILQLANLPDLYKVFERC
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggtgacccccggggtgatccgcaggctggaggagacggtggtgaataggatcgctgct
ggcgaggtgatccagagacctgcgaatgccattaaagagatggtggagaacagtttggat
gccaaatctacaagtattcaggttactgtaaaggatggtgggctgaagttgattcagatc
caggataatgggaccggcatcaggaaggaagatttggaaatactttgtgaaagatttact
acaagcaagttacagaaatttgaagatctcgctagtattgctacttatggattcagagga
gaggctcttgccagcataagccatgtggcacatgtcactgtaacaaccaaaactgctgat
ggaaaatgtgcattcagagctaactactgtgacgggaggttaaaggctcctccaaagcca
tgtgctggaaaccagggtacacagattaccgtggaagatcttttttacaatattgccaca
agaaggaaggctctgaaaaatcccagtgatgagtattctagaatcgtggaagttatgagc
aggtatgcaatccacaattcaggagtgagctttgctgtgaagaagcaaggtgaaactgtt
gctgatgtgagaacattgcctaatgcctcaactctggacaatattcgaacaatatttggg
aatgctgtaagcagggaattaattgaagtatgttttgaagatccaaaatttgctttcaca
atgaaaggctatatatcaaatgcgaactattctgtgaaaaagtgtatctttttacttttc
atcaatcatcgcttggtggaatccactgctttacggaaggcaatcgaaactgtctatgca
gcctatcttcctaaaaatacacatcccttcctgtatctgagccttgaaatattgccacag
aatgttgatgtaaatgttcatcccacgaagcatgaagtacattttctccatgaggacagt
atcattgagagtgtgcaacaacatattgaaagtaagctacttggttccaactcctcaaga
acctacttcacacagactttactacctggcccaaccataacctccaatgactttatcaag
ccttcagtagcatcagctacacttccaagttcgagcgacaaaccatatgctcatcaaatg
gtgcgcacggactccaaggaacaaaaaattgatgcctttctacaaccaatcaacaaacca
caggaggcactacccactactgtttctgttgatggaggaactgagtgtcaggactctgag
atggaggacctaagtgatattgacttacttgctgcggaaaaagctgggagctcaagtatg
agcattcagaaacccttgcgtccatgcaatgatgacccatccagtgccccagccaggaaa
cgatcaagggtagattcaccaggtgagataaaagaagcgaactccagccatgagatgaca
gctgcccatcttccaaagaggagaattattaacttaaccagtgttctcaccctgcaaggg
gagatcagcagtcagaaccatgcaggcctacaggatatgttacagaatcattcatttgtt
ggttgtgtaaatcctcagtgggcactggtgcagtatcaaacaaaactttacctgatcaat
actactaaactcagtcaggaattattctaccagatcttaatctatgactttggtaatttt
ggagtgttgaagttgtcgagccctgcccctttgtatgaactggcaatgctagcattggat
agtccagaaagcggctggacagaagaagatggtcccaaagaaggattggcagagtatatt
gttgattttttgaaaacaaaatctgaaatgctacaagattacttttcccttggtattgat
gaggaaggaaacctgactggattacctctactcttggaaaactatgttccagctctggag
gggttgccaatgttcatcctgcgtctcgctacagaggtgaactgggatgaagaaaaggag
tgttttgaaaaattaagcaaggaatgtggtatgttttactccatcagaaaagaatataca
ctggatacagaatctcaggtgtcaccaaatccgagtcagcagcaggagtttggtagtgac
aagccctggaagtggactatagaacatgttgtttccaaagctttcagaactctcctcctt
ccaccgaaacacttcgcagaggatggatccatcctgcagcttgccaatctgcctgatctg
tacaaagtatttgagagatgttaa
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