Hemiscyllium ocellatum (epaulette shark): 132812341
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Entry
132812341 CDS
T09720
Symbol
dhx29
Name
(RefSeq) ATP-dependent RNA helicase DHX29
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
hoc03012
]
132812341 (dhx29)
Enzymes [BR:
hoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
132812341 (dhx29)
Translation factors [BR:
hoc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
132812341 (dhx29)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_DHX29
Helicase_C
DEAD
HA2_C
OB_NTP_bind
DSRM_DHX29
AAA_22
HA2_N
nSTAND3
ATPase
nSTAND1
AAA_16
FtsK_SpoIIIE
T2SSE
AAA_19
HicA_toxin
Motif
Other DBs
NCBI-GeneID:
132812341
NCBI-ProteinID:
XP_060678915
LinkDB
All DBs
Position
1:complement(76357299..76482408)
Genome browser
AA seq
1369 aa
AA seq
DB search
MGGKKKKKRAEAAAVAAATAAVRLPRPDGAQPEGEKKNQSLRPAAAKPSTKEVKAGPKTY
SFGTTSSNELNTAGNLDRSIPKVVIKPELEQKIIRLINQFKTQHGKLGTISGRLTAKKLQ
DLYIALQGFSFRAEDIEEAMKNTVIYGGDLHSALDWLCLNLPDDSLPDGFRQKLQEEETK
TKPKFQLPVKAEINYEKSEVQKGDDKPQTKAAESGSTQVSMKEWILQYAEKASGSGDDDS
DDPNNELPEKTCEKEERFDPNELYLELTAKLVDVKERALSFKHNNNKHAHREASERIKIL
QQEIKQLEKHPAFDRSIKMVDIKKNGKSLPELPDDKHEDALNLTLLEESTPKLKDKPRNE
PKDVRNFDYTSRSWTGKSPKQFLIDWCRKNLPTSPAPNYRKIPVGRFWKCSVRVNRQKDG
ILEVCPTILSEDAMQAQHLASTLALWHLVRGQAVHQLLPPTYREVWIEWSEAEKKKTETR
QMEKNKPRDQFITKLLNTLKQKPSTCISSTTEDLEDSWENLITEDDFRSLCIAKERDDNL
NSAKIILKNLQSSVKFQKLLKERQLLPVFQHRKQILETLRRHRVVVVAGETGSGKSTQIP
QFLLDDLLSSETTQCNIICTQPRRISAVSLATRVCEELGCEEGPGGKNSLCGYQIRLESK
IGELTKLLYCTTGVLLRKLQHDAFLTTVSHVIVDEVHERSVQSDFLLIILKELMQKRSNL
NLILMSATVDSDKFARYFGHCPVINIPGRIYPVEVYHLEEVVEETGYILEKDSEYCQRFL
EEEEEINVTVTGKGGKTFQHQEYLVKGTQPGNNFLIDLEKYSSRTCHAIQYMHPTKINMD
LILDLINFLDKSAPFRAVDGAVLVFLPGLAHIQQLYDLLTTDKRFQDRKRFKVIALHSIL
SSQDQAAAFKVPPQGVRKIVLATNIAETGITIPDVVFVIDSGKTKENRYHESSQMSSLVE
TFISKANALQRQGRAGRIREGFCFRLYTQERYDSFIDYSVPEILRVPLEELCLHIMKCNH
GSPEDFLARALDPPQLQVISNAMNLLRKIGACEINEAKLTPLGQHLAALPVNVRIGKMLI
FGAIFGCLETVATIAAAMAEKSPFVTPINGKEEANLAKSALALANSDHLAIYKAYLGWKN
VRSDGYRAEMAYCKKHFLSRTTLITMEDIKQELIKLMEAAGFVPSRTTGIKHQSCSKGPL
AEHPRKSLSDKEILLLKAVLTAGLYDNIGKIIYTPSVDITDKVICCVETAQGKAQLHPSS
VNRDLQTNGLLLYKEKVKYGRIYVQETTLTSPFPVLLFGGAIEVMHRERLLSVDGWIHFQ
APVRTGIIFKELRSLIESVLLKKLEDPKISIEDDEIIQIIMELIKTEHC
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgggggggaagaagaagaagaagcgagccgaggctgcagcggtggcggccgcaacggca
gcggttcgactcccacgtccggatggagcgcagcccgagggcgagaagaaaaatcagagc
ctgcggccggcggctgccaaaccgagcacgaaggaggttaaagcaggcccaaagacatat
agctttggcacaacctcatctaatgaattgaatactgctggaaatttggatagatccatt
cctaaggttgtgattaaacctgaactggaacaaaagataataagactgattaaccaattc
aaaacccaacatggcaaattgggaaccatctctggaaggctcacagcgaaaaaactgcag
gacctatatatagctttgcaaggattttcatttcgtgcagaggacattgaagaagccatg
aaaaacactgtcatttatggtggagatcttcattctgctttggactggttgtgtttaaat
cttccggacgattcattacctgatggattcaggcagaaactgcaggaggaagagaccaag
accaagcctaagtttcagctgcctgtaaaggctgaaataaattatgaaaaatctgaggtt
caaaaaggtgatgataagccccaaactaaggctgctgaaagtggaagcacgcaagttagc
atgaaggaatggattttacaatatgctgaaaaagcaagtggtagcggagatgatgacagt
gatgatccaaataatgaattacctgagaaaacttgtgaaaaggaagaacgttttgatccg
aatgaactttacttggagctgacagcaaaactagttgatgttaaagaacgggctttgtcc
tttaaacataataataacaaacatgctcacagagaagcaagtgaaagaataaagatacta
caacaggagattaaacagttggagaagcatcctgcttttgatcgttcaatcaagatggta
gatataaagaagaatggcaaaagtttgcctgaacttcctgatgataagcatgaagatgcc
cttaacctaaccttgctggaagaatcaacaccaaaattaaaagataaaccaagaaatgaa
ccaaaggatgtacggaactttgactacacttcacgaagttggacagggaaatctcctaaa
caatttctgattgattggtgccggaaaaacctccccactagtccagctcctaattatcgc
aaaatccctgtgggtagattctggaagtgtagtgtaagagtaaacagacagaaggatgga
atattggaagtatgtcccacaattctctcagaggatgccatgcaagcccaacatctggca
tctacattggccctgtggcatttagtaagaggacaggctgtacatcagctactcccacct
acatatcgtgaggtgtggattgaatggagtgaagctgagaagaagaaaactgaaacgagg
cagatggaaaagaataaacctcgagaccaattcattaccaaattgttaaatacactaaag
cagaaaccatccacttgcatttcatcaacaacagaagatctagaagattcctgggagaat
ttgataactgaggatgacttcagaagtttatgtattgctaaggagagggatgataatttg
aactctgcaaagattattttaaaaaacttgcaaagttcagtcaagtttcagaaacttttg
aaagagaggcaactgttacctgtctttcaacacagaaagcaaattcttgaaactctcaga
aggcatcgagtggtggtggttgcaggtgaaacaggcagtgggaagagcacacaaatacct
cagttccttttggatgatttattgtcaagtgagactacacaatgcaatattatttgtacc
caacctcgaagaatttcagcagtgagtctggccactcgtgtttgtgaggaacttggttgt
gaagaaggtcctggaggaaaaaactctctttgtggttaccaaatcagattggaatcaaag
attggagaattgactaagcttttgtactgcactactggtgttcttctgcggaaactgcaa
cacgatgcatttctcactactgtgtctcatgtaattgttgatgaggttcacgagaggagt
gtacagtcagattttctgttgatcatactgaaggagttgatgcaaaaacgttcaaatcta
aacctaattttgatgagtgcaactgtggacagtgataagtttgctcggtactttggccat
tgtcctgttatcaatatccctgggagaatttatccagttgaggtttatcatttggaagag
gtggtggaagagactggctacattttggaaaaggattctgaatactgccaacgatttttg
gaggaggaggaagaaatcaacgtgacggtcactggcaaaggaggaaaaacatttcagcat
caggagtatcttgttaaagggacacagcctggtaataattttttaatagaccttgaaaaa
tacagtagtcgtacttgtcatgctattcagtacatgcatccaaccaaaataaacatggat
ctcatattggatctcattaacttcttggataaaagtgccccattcagagcagttgatggt
gcagtgttagtattcttaccgggtctggctcatattcaacaactatatgatcttctaact
acagacaaaaggttccaggacagaaaaaggttcaaagtaattgctttgcactccattctt
tcatctcaagatcaagctgcagctttcaaagtcccaccacaaggggtcagaaagattgtt
ctggcgacaaacattgcggaaacaggcatcacaatacctgatgtagtttttgtcattgat
tctggaaagaccaaggagaacaggtatcatgaaagtagccaaatgagctcactggtggag
actttcatcagcaaagccaatgctcttcagaggcagggtcgagctggccgtatcagagaa
gggttctgttttcgtttgtatacccaagaaaggtatgatagtttcatagattattctgtc
ccagaaatcctgcgagttccactggaagaactttgtcttcatatcatgaaatgcaatcat
ggatctccagaagattttcttgccagagctttagacccaccacagctccaggtcatcagt
aatgctatgaatttgctgaggaaaattggagcctgtgaaatcaacgaagctaaactcaca
ccattaggtcaacatcttgctgcccttccagtaaatgtgagaattgggaaaatgttgata
tttggtgccatttttggctgtttggaaactgtggcaaccatagctgcagccatggcagag
aaatctccctttgttacaccaataaatgggaaagaagaagctaaccttgcaaaatcagct
ctggcattggctaattcagatcacctggccatttacaaagcatatttaggatggaagaat
gtgcgatcagatggctatcgtgctgaaatggcttactgtaagaaacactttctgagtcgg
actacacttataacaatggaggatattaaacaggaacttattaagctgatggaggcagca
ggttttgtgccatcaagaaccacaggaattaagcatcaaagttgcagcaaaggacctttg
gcagagcacccaagaaagagtttatcagataaggaaattctgcttctgaaagctgtacta
acagcaggactgtatgacaatattgggaagattatttacacaccgtcagtggatatcact
gacaaggtgatctgttgtgtcgaaactgctcaaggtaaagcacaattacacccttcatct
gtcaacagagatctgcagacaaatggtttgcttctgtataaggaaaaggtgaaatatggc
aggatatatgtgcaagaaacaaccctgacttcaccttttccagtgttgctgtttggtggt
gctatagaggtgatgcaccgtgaaagattactttcagttgatggctggatacattttcag
gctcctgtcagaacaggaatcatttttaaggagctgagatccttgattgaatctgttcta
ctaaagaaacttgaagatccaaaaatatcaattgaagatgacgagataatacagataatt
atggaactgatcaagactgagcattgctga
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