Hemiscyllium ocellatum (epaulette shark): 132812828
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Entry
132812828 CDS
T09720
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hoc03036
]
132812828 (ddx4)
Enzymes [BR:
hoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132812828 (ddx4)
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
132812828 (ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
132812828
NCBI-ProteinID:
XP_060679010
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All DBs
Position
1:76820874..76966602
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AA seq
679 aa
AA seq
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MTEDWDAELGTEPVAIIPSFNDMAGLMNEDINGNPSFNLKGSGDGNGFNTSDRNIFGRSG
GFGKQQVAGFTEATTVNRNEFDGRGGRRCGFGRGDRAGLPRVGAQNVAAKASGDGPFGRG
GPVGRGGPSERGGFGGQSGDSGGFRLNRGRTGFQSPLVTRGGYRGRNEEPFSGSTSKLAG
RWNSGDVEGDKSQGPKVTYVPPPPPEEESAIFSRYQTGINFDKYDDILVDVSGFNVPPAI
LSFDEAHLCETLNKNINKAGYLKPTPVQKHGIPIVLSGRDLMACAQTGSGKTAAFLLPII
EMLLRGNAASSRFKELQEPDVVIVAPTRELINQIYLEARKFSYGTVLKPVVVYGGTSTSH
QIRQVLQGCNILCGTPGRLLDIISKGKVGLGKVQYLVLDEADRMLDMGFEPDMRKLVDSF
DMPPKQNRQTLMFSATFPEEIQRLAADFMKNDYLFLAVGQVGGACGDVQQSILQVDQYSK
RNKLVEILTNIGIERTMVFVDTKRKADFLATFLCQEKFPTTSIHGDREQREREIALSDFR
TGKCPVLVATAVAARGLDIEHVQHVINFDLPSTIDEYVHRIGRTGRCGNVGKAISFFDSN
TDLPIARALLKVLSDAQQEVPIWLEEFAYAAHGTSYHNPLGKVFASVDTRKGLGVNRNFS
GYETNIPVTYGGNSEDTWD
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagactgggatgcggaattaggaacagaaccagttgccattattccatctttt
aatgatatggctggtctaatgaatgaagatatcaatggcaatccatcatttaacttgaaa
ggatctggagatgggaatggttttaacacgagcgatagaaatatatttggcagaagtggt
ggatttgggaagcagcaagtggctggctttacagaagctactacagtgaacagaaatgaa
tttgatggcagaggcggaagaagatgtgggtttggcagaggtgatcgtgctggattacca
agagttggtgctcagaatgttgctgcaaaagcaagtggagatggtcctttcggccgaggt
ggcccagttggtagaggtggccctagtgaaaggggaggatttggtggccaatcaggtgac
agtggaggatttcgtctaaatcgaggaagaacaggctttcagtcacctcttgtaacaaga
ggtggttacagaggcagaaatgaagaacccttttctggatctacttctaaattggcaggt
cgttggaattctggtgatgttgaaggtgataaaagccaaggccctaaagtgacctatgtt
cctcctccaccacctgaagaagagagtgccatcttttctcgctatcagactggtattaac
ttcgataaatatgatgacattttggttgatgtttcaggatttaatgttccccctgcaata
ctgtcgtttgatgaagctcacctgtgtgaaactttgaacaagaacataaataaagcaggg
tatctaaaaccgacaccagttcagaaacacggaataccaattgtactttctggacgggat
ttgatggcttgtgctcaaacaggctctggaaaaacagctgcgttcctgttgcccataata
gaaatgctactgaggggaaatgcagcatccagtcgatttaaagaactacaagaaccagac
gttgttattgtagccccaacacgtgagctgatcaatcagatatatctggaagctaggaag
ttttcttatgggactgttttgaaacctgttgtcgtctatggaggaacaagcaccagccat
caaatccgtcaggttttacaaggctgtaatatattgtgtggcactccaggaagacttctg
gatattatttctaaaggaaaagttggacttggtaaggtgcagtacttggtattagatgaa
gcagaccgtatgctcgatatgggatttgaaccagacatgcgaaaactagtcgactccttt
gatatgccacctaaacaaaaccgccagactttgatgttcagtgccacctttcctgaagaa
attcaaaggttagctgcagacttcatgaagaatgattatttgttccttgctgttggtcaa
gtaggaggtgcttgtggtgatgtccagcaatctatactacaagttgaccagtattccaaa
aggaacaaattggttgaaatactcactaacataggtattgaacgaactatggtttttgtc
gataccaaacgaaaagctgactttcttgctacttttctttgtcaagaaaagttcccaacg
acaagtattcatggtgatcgagagcaaagggaaagagagatagcactcagtgatttccgt
acagggaagtgtcctgttttggtggctacagcagtagcagctcgcgggctggacattgag
catgtacagcatgttatcaattttgatttgccttcaacaatcgatgaatatgtccatcgt
attggacgtacaggccgttgtgggaacgttggcaaagcaatatcattctttgattcaaat
acagatttgccaatcgcacgtgctctcttaaaggttctgtctgatgcacaacaagaggtt
cctatatggctagaagaatttgcttatgccgctcatggaaccagttaccataatccactt
ggaaaagtgttcgcttccgtagatactcgtaagggtctgggtgtaaacagaaacttcagt
ggatatgaaacgaatataccagtgacatatggaggaaacagtgaagatacttgggattaa
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