KEGG   Hemiscyllium ocellatum (epaulette shark): 132814020
Entry
132814020         CDS       T09720                                 
Symbol
dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13 isoform X1
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
hoc  Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:hoc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hoc03009]
    132814020 (dcaf13)
   04121 Ubiquitin system [BR:hoc04121]
    132814020 (dcaf13)
Ribosome biogenesis [BR:hoc03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    132814020 (dcaf13)
Ubiquitin system [BR:hoc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     132814020 (dcaf13)
SSDB
Motif
Pfam: Sof1 WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 WD40_WDHD1_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st eIF2A Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 MIOS_WD40 Beta-prop_WDR35_TULP_N KNTC1_N Beta-prop_WDR19_1st UvrB_inter
Other DBs
NCBI-GeneID: 132814020
NCBI-ProteinID: XP_060679320
LinkDB
Position
4:67234249..67318230
AA seq 445 aa
MKVKILSRNPDDYVRETKNDIQRVPRNYDPVLHPFEIPREYTRALNATKLERVFAKPFVA
SLDGHGDGVHCMAKHFKSLSRIISGACNGEIKIWNLMNRQCIRTVQAHSGFVRGLCSRFC
GTSFFSVGDDKTIKQWKMEGPSFEEQEEPIHTILGKTVYTGIDHHWKDGVFATCGQQVDI
WDEQRTSPIRSFTWGVDSISSIKFNPIETYLLASCASDRNIALYDMRQATPLKKVVMDLR
TNAICWNPMEAFIFTGANEDYNLYTFDMRYLDSPLTVHMDHVSAVLDVDYSPTGKEFVSA
SFDKSIRIFPTNKGHSREVYHTKRMQHVMCVKWSADNKYILCGSDEMNIRLWKANASEKL
GVLSPREKASLNYNQKLKEKFQHHPRIKRIARHRHLPKMIYNQSKELRIMREARRRKELN
RRKHRKPGSVPFVSEKKKHIVAVVK
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgaaggtgaaaatcctgtcccgcaatccggatgattatgttcgagaaacgaagaatgat
attcagagagttccaaggaattatgatcctgtactgcatccttttgagataccaagggaa
tacacgagagcactgaatgcaaccaagctggaacgggtttttgctaaaccttttgtagca
tcattggatggtcatggggatggagtgcattgtatggccaaacactttaagagtttgtcc
agaataatctctggagcttgcaatggcgagattaaaatttggaacttaatgaatcgtcag
tgcatccgtactgtacaagcgcattctggttttgtcagagggctctgttccagattctgt
ggtacatccttcttttcagttggtgatgataagaccatcaagcaatggaaaatggagggt
ccttcatttgaggagcaagaagaaccaatacacacaatactaggcaagactgtttacaca
ggaattgatcaccattggaaggatggtgtgtttgcaacttgtggacagcaggtggacatt
tgggatgagcagaggaccagcccaatccgctcgtttacttggggtgtggacagtatcagc
agtattaaattcaacccaatagagacttaccttcttgcaagctgtgcttcagatagaaat
attgctctgtatgacatgagacaggcaacccccttgaaaaaggtagtcatggacctacgg
actaatgctatatgttggaaccccatggaggcctttattttcactggagcaaatgaggat
tacaatttatacacatttgacatgcgctatcttgatagccctctaacagtgcacatggat
cacgtttcagcagtacttgacgttgattactctccaacaggcaaagaatttgtctcggcc
agctttgataaatccatacgtattttccctacaaacaaagggcatagcagggaggtgtac
catacaaaacgtatgcagcacgtgatgtgtgtaaagtggtctgctgataacaagtatata
ctttgtggttctgacgaaatgaatatccgtttgtggaaggctaatgcttctgaaaagctt
ggtgtactttcaccaagagaaaaagctagtttgaactacaaccaaaaactgaaagaaaaa
ttccagcatcaccctcgcatcaaacgcatagcccgtcaccgccatttgccgaaaatgatt
tacaatcagtcaaaggaactccgtatcatgagggaagctcgtcgcagaaaggaactaaat
cgtcgcaagcacagaaaaccaggctctgtaccatttgtgtccgagaagaagaagcatatt
gtggctgtggtaaaatag

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