Hemiscyllium ocellatum (epaulette shark): 132814205
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Entry
132814205 CDS
T09720
Symbol
copa
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hoc04131
]
132814205 (copa)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hoc04147
]
132814205 (copa)
Membrane trafficking [BR:
hoc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
132814205 (copa)
Exosome [BR:
hoc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132814205 (copa)
Exosomal proteins of bladder cancer cells
132814205 (copa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
132814205
NCBI-ProteinID:
XP_060679403
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILASLHNGVVQLWDYRMCTLIDKFDEHDGPVRGIDFH
EQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGISGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNDSKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMIVFKLERERPAYAVHGNALFYVKDRFLRQLDFHSSKDVAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRASNLENSTYDLYSIPKDSDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDPDAITLFDVQQK
RSLSSVKISKVKYVIWSGDMAHVALLSKHAILICNRKLESLCSIHENIRVKSGAWEESGV
FIYTTSNHIKYALVSGDHGIIRTLDLPIYITRVKGNSVYCLDRECRPRVLTIDPTEFRFK
LALVNRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKVLDNKCCWEKLGELALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVLERVRILKNCGQKSLAYLTAATHGLDEEAEALKASFDP
EKETVPEIDPDAKLLQPPPPIMPLDTNWPLLTVSKGYFEGSIAPKGKGGQLAVDPSMESA
GGEGWGDDAELLLDEDGFTDAAEGFGEEASGRAGEEGGGWDVEEDLELPPELEVAGGIPG
GTEDGFFVSPSKGNSPGQVWCNNSQLPADHLVAGSFETAARLLHDQVGVVNFAPYKSLFL
QAFARGRSVYQALPCLPSMYGYPQRNWKEAGLKSGLPAVGLKLSDLIQRLQVCYQLTTAG
KFEEAVERFRLILLSIPLLVVDNKQEIAEAQQLITICREYILGLSMEIERKRLPKDTLEQ
QKRICEMAAYFTHCSLQPVHMILVLRTAVNLFFKLKNFKTAAAFAGRLLELGPKPDVGQQ
TRKILAACEKTPNDAHHLNYDMHNPFDVCAASYRPIYRGKPVEKCPLSGACYSPEFKGQI
CRVTTVTEIGKDVIGLRVSTLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccaaattcgagaccaaatcagctcgggtcaaaggattgagcttccacccgaaa
cggccctggatcctggccagtctgcacaatggggtggtgcagctctgggactatcgcatg
tgcaccctgattgataaattcgatgaacatgacgggcctgtccgagggattgatttccat
gagcagcagcctctgtttgtctctggcggtgatgactacaagattaaggtgtggaattat
aaactccggcgatgcctcttcaccctgctgggtcacctggattacatccgcaccaccttc
tttcatcatgaatatccatggatcctgagtgcttccgatgatcaaactatccgaatttgg
aattggcagtctaggacgtgtgtctgtgtgctgaccggacataaccactacgtgatgtgt
gcccagttccacccatctgaggacctggtcgtatcagctagtctcgaccagaccgtccgg
gtctgggacatttccggactccggaagaagaacctatcccccggggcggtggagagcgac
gtgcgtgggatctctggcgtcgacctctttgggaccaccgacgcggtggtcaaacacgtc
ctggagggccacgatcgaggtgtcaactgggcagctttccatcccagcatgcccttgatc
gtgtcgggagcagacgaccggcaggtcaagatctggcggatgaacgactcgaaggcctgg
gaggtggacacgtgccgtggtcactacaacaacgtgtcctgtgctgtcttccacccacgt
caggagctgatcctcagtaactcggaggacaagagtatccgggtctgggacatgtccaag
agaactggagtacagacgttccggcgagaccacgaccggttctgggtgcttggagcccac
cccaacctcaacctgtttgcagccggtcatgacagcgggatgattgtgtttaagttggag
agggagagaccggcctatgctgttcacgggaacgccctgttctacgtcaaagaccgtttc
ctccggcaactcgacttccacagctcaaaggatgtggctgtgatgcaactccgcagtggc
tccaagttccctgtgttcagtatgtcctataacccagcagagaatgcagtgctgctgtgt
acgcgggcgagtaacctggagaacagcacctacgacctatacagcattcccaaggactcc
gactcccagaacccagacgctcctgaaggcaagcgctcctccggcctcaccgctgtctgg
gtggcccgcaaccgttttgccgtgttggaccggatgcactctatcctgatcaagaacctg
aagaatgagatcaccaagaaagtgcaggtgcccaactgcgacgagatcttctacgcgggc
accgggaacctcctcctcagagaccccgacgccatcacactgttcgacgtgcagcagaag
aggtcactgagctccgtcaagatctcgaaggtgaagtacgtcatctggtcaggtgacatg
gcccatgttgctctgctctcgaaacatgccatcctgatttgtaaccgcaagctggagtct
ctctgcagcatccatgagaacatccgagtgaagagtggagcctgggaggagagcggagtg
tttatctacaccaccagcaaccacatcaaatacgccctggtctccggggaccacgggatc
atccggaccctggacttgcccatctacatcacccgggtgaagggcaacagtgtctattgc
ctggacagggagtgtcgcccccgggtactgaccatcgaccccaccgagttccgcttcaag
ctggcgttggtcaaccgcaagtacgacgaggtgctgcacatggtgcgcaatgccaagttg
gttggtcagtcgatcattgcctacctgcagaagaagggttaccctgaggtggcactgcac
tttgtgaaggatgaaaagacccgattcagcctggcgttggagtgtggcaacatcgagatc
gccctggaggcggccaaagtgctggacaacaagtgctgctgggagaagctgggggagttg
gcgctgcttcagggcaaccaccagatcgtggagatgtgctaccagcgcaccaagaacttc
gacaagctctccttcctgtacctcatcaccggcaacctggagaaactccgcaagatgatg
aagatagcggagatccggaaggacatgagtggtcactaccagaacgctctgtatctgggc
gacgttctggagagagtccgcatcctcaagaactgcgggcagaaatccctggcctacctg
actgcagcgactcatggcctggatgaggaggccgaggctttgaaggcgagcttcgaccct
gagaaggagacggtgccagagattgaccctgacgccaagcttctccagccgccgcctccc
atcatgcctctggacaccaactggccgctgctcactgtctccaagggttacttcgagggc
agcatcgcacccaagggtaaagggggtcagttagctgttgacccttccatggagagtgct
gggggggaaggttggggtgacgatgcagagctgcttttggatgaagacggattcaccgac
gctgccgaggggttcggagaggaagcgtccgggcgagccggtgaggagggaggcggctgg
gacgtggaggaggacctcgagttgccccccgagctggaagtcgctggcgggattccaggc
ggcaccgaagatggcttcttcgtctctccctccaaagggaacagccctggccaggtatgg
tgcaacaactctcagctgcccgctgaccaccttgtggcaggatcctttgaaactgcagcc
cggctccttcatgaccaggtcggtgtggtgaactttgccccatacaagagcctcttcctt
caggccttcgcccgcggtcgctcggtctaccaggccctaccctgccttccctccatgtac
ggttacccgcagcgcaactggaaagaggcaggtctgaagagcggccttccagcagtaggc
ctcaaactgagcgacctgatccagcggctgcaggtgtgctaccagctcaccacggccggg
aaattcgaggaggcggtggagcgcttccgcctcatccttctcagcattcccttactggtg
gtggataacaagcaggagatcgccgaggcccagcagctgattaccatctgtcgggagtat
attctgggcctgagtatggagattgagaggaagcgattgcccaaggacactctggagcag
cagaaacggatctgtgagatggcagcgtatttcacccactgcagcctccagcctgtccac
atgatcctggtcctgaggacagctgtcaatctcttcttcaaactcaagaacttcaagacg
gccgctgcattcgctggcagactgctcgagctgggccccaaacccgacgtcgggcagcag
actcgcaagatcctggcagcttgtgagaagaccccaaatgatgcccatcatctcaactac
gacatgcataaccccttcgacgtctgtgcagcttcatacagacccatctacagggggaaa
cctgtcgaaaaatgtcctcttagtggagcctgctacagtcccgagttcaagggtcaaatc
tgccgtgtgactacggtgactgagatcgggaaggatgtaatcggactgcgtgtcagcaca
ctccagtttcgctga
DBGET
integrated database retrieval system
