Hemiscyllium ocellatum (epaulette shark): 132814304
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Entry
132814304 CDS
T09720
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132814304 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hoc01009
]
132814304 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hoc04131
]
132814304 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
hoc03029
]
132814304 (rb1cc1)
Protein phosphatases and associated proteins [BR:
hoc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132814304 (rb1cc1)
Membrane trafficking [BR:
hoc04131
]
Autophagy
Autophagosome formation proteins
ULK complex
132814304 (rb1cc1)
Mitochondrial biogenesis [BR:
hoc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
132814304 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
ubiquitin
TBK1_ULD
Pneumo_M2
YIEGIA_cap
Motif
Other DBs
NCBI-GeneID:
132814304
NCBI-ProteinID:
XP_060679454
LinkDB
All DBs
Position
4:76363895..76576766
Genome browser
AA seq
1596 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQTVADLKHAIQAKYKIATQHQVLVVNGGECMVADRRVC
SYSAGTDTNPIFLYNKEMILCDRAPTIPKTTFSAENEMGLKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCERLVHDEHLQHQGWAAIMANLEDCTHSFQKLLAKFENAYINYEH
SVEDIKQKLTNLGTAVSVMAKIPLLECLTRHSYRECQERLKLPTQKGSTEEESEDVKSTS
SALCSVKSTVNRNSASSSISFGCSAQNSVIQQEEKDNETIEDRTQKTEAEGESKEVDDQA
FFNVSLLDWINVQDRPNDVESLVRKCFDSMNRLDPEILQPFLTECHETIVKLDNQNMKAI
KGLEDRLYALDQMIASCNRLVNEQKELAQGFLANQQRAENLKDPSVLPDLCLSHANQLMI
MLTNHKKLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQNGEKLQALLRLLTELQER
IRIVEALSNVPQMYCLAVVEVVRRKVFTKHYREWASALVKEGKQFYEAERVKRESFGKLF
RRSFLRNRLFKGLDSWPPSSFCTHKPRKFDFELPDVSLTDLQFLQSCCPSEVQPFLRIPT
LCDFEPLQQHHQILRNLVKAAQSLDEMSQTITDLLTEQKVSLDQTSVTTPTKHKLESTTR
TKTTSSRSTSTLSLQGPICPPANVPASLEELSPDSIDAHTFDFETIPHPNLEQVLKQGSI
DMDSLAESPESDFVSAVNEFMIEESSTSPNINSDPQSPEMMLESLYSSVINAIDNRRMQD
TTFGENEDSKEVATLKVHIEKYRLITEMSQLHFINIKKDLNHFRELVQKEQCDFSSSMKN
VSEELRSLIETVKCRVEVGAKENYQQKLEILRKDYKDQMDKLNVELVTAQQNTDKLKKDL
LELENYIKQKDCEFTEVRTENETLLCLQISKDKEINDLVEGRKKQETEIQELRQSRESLL
EELNRLHITADHEMKCLREELQTLEQSHLKDLEDDLKVRHHQELKKLLADHSKQQEQISK
ENEARLDHVQQSLTIKLQEREQELNELKLNVSELSDSRCNLEAELALKEVETEKLKQRLK
ETQVQQEEIAKCQVMKETEKYREEITDLKHQLQLKLEEYKVGLAEERILMTTEKDQCISD
LLDRQEQEKAILKAELDKLDVMRQQALDMEVALRGQVEELTTKLKECLKTMETEREEMMS
EKQRIAFEIEAKYKATIHDLEEEKEQLLNTSLEREEFMRSKMHEDCECKKQALEQELQIK
NQQSERPLEDQSRAESYDPVSSTSVKWTPPASAIADLTGKFQEEKANLLDQLEKRNEELQ
SLKTSLIAEQQTNFNTVLTREKMKREQIITELNDKLRKLTQQQEKDRVLIETLSADRATL
LQEKKQLDEELNRLRSNALVCSTFPSPGTSGAESSVPGPDIPFDSERLAPAAAVAEEIRI
ESAMEASTMTVRETIQMSEEKHRIMILERTLQMKEEENKRLNQRLMSQSMSSVSSRHSDK
IAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYFLHSESLGALDLKPVPGSSRRPWVLGK
VMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtatttctggttaacactggaactactcttacatttgacacagaactt
gcagtacagactgttgcagatctgaaacatgcaatccaagctaaatataagattgcgact
cagcatcaagtgttggtcgtcaatggaggagagtgcatggttgctgacagacgtgtttgt
agctacagtgctgggacggatacaaatcccatatttctgtacaacaaagagatgattctg
tgtgatcgtgcaccaactatacctaagacaacgttttctgcagaaaatgagatggggctt
aaggtggaggagtccctaatgatgccggctgtatttcacacagtagcctctagaactcaa
cttgctgtggagatgtatgaagtagcaaagaagctttgttcattctgtgaaagattggtc
catgatgaacatcttcagcatcaaggttgggctgccattatggccaatttggaggactgc
acacattcttttcaaaagctgctggcaaagtttgaaaatgcatacatcaattacgaacat
tctgtggaagatattaagcaaaaacttacaaacttaggcactgcagtctctgtaatggcc
aagataccactgttggaatgcctgaccaggcacagttaccgagaatgtcaggaaagactg
aaattaccaacacagaaaggaagtacagaagaagaaagtgaggatgtgaaatctaccagt
tctgcactttgttctgttaaatctacagttaacaggaattcggcgtctagttccatatct
ttcggatgttctgcacagaatagtgttatccaacaggaagaaaaggacaatgagaccatt
gaagacagaacacagaaaactgaagcagaaggtgaatccaaagaagtagatgaccaagct
tttttcaatgtttccttattggattggattaatgtacaagatagaccaaacgatgtggaa
tcactggtcaggaaatgctttgattcaatgaaccgacttgatccagaaattcttcagcca
tttttgacagagtgtcatgaaacaattgtcaaacttgataatcagaatatgaaggctatt
aagggacttgaagacagactatatgccctggatcaaatgatagccagctgtaacagactg
gtgaatgaacaaaaagaattagctcagggatttttagcaaatcagcagagggctgaaaac
ctgaaagacccatcagttcttcctgatttatgtctgagtcatgcaaatcagttaatgatt
atgttaacaaaccacaagaaactgctggatattaaacagaaatgtaccactgctaagcag
gaacttgcaaataacttacaagtcagattgaaatggtgctgttacgtgatgcttcatgca
gatcagaatggtgaaaaactccaggctttgctaaggcttctgacagaactgcaagagaga
atacgaattgttgaggcacttagcaatgttcctcaaatgtactgccttgctgtagttgag
gtagtaaggcgaaaagtgttcactaaacattacagagagtgggccagtgctcttgtaaaa
gaaggaaaacagttctacgaagctgagcgagtaaaaagggaatcctttgggaaactgttt
cgaagatcatttcttcgaaatcgcttgtttaaggggctcgactcttggccaccatcatcc
ttctgtacacacaagcctcgaaagtttgactttgagcttcctgatgtatcattaactgac
ttacaatttctgcagtcctgctgtccttcggaagttcagccttttctcaggattcctaca
ctgtgtgactttgaaccattacagcagcatcatcaaattcttcgtaatttagtcaaagct
gctcagagtttggatgaaatgtcccagaccatcactgacttgttgactgagcaaaaggtg
tctctagatcaaacttcagtaacaacaccaacaaaacacaagttggaaagcacaaccaga
actaaaactacctcttctagatccacatcaacacttagccttcagggaccaatctgccca
cctgctaatgttcctgcctcattagaagagctgtctcctgatagtattgatgcccatacg
tttgattttgaaaccattcctcatccaaatttagaacaagttctcaaacaaggatctata
gatatggactcattggcagaaagtccagagtctgattttgtgtcagctgtaaacgaattt
atgattgaggagagctcaacttcacccaacataaacagtgatccacaaagtcctgaaatg
atgcttgaatcattatattcttcagttattaatgccattgataatcgacgcatgcaggat
acaacttttggtgaaaatgaggattctaaagaagttgcaactcttaaagtgcatatagaa
aaatacaggcttatcactgaaatgtctcaattgcattttataaacattaagaaagacctt
aatcatttcagagagcttgttcagaaggagcagtgtgattttagtagttcaatgaaaaat
gtaagtgaagaattaagaagcctaattgaaactgtaaaatgtagagttgaagtgggagca
aaagaaaattatcagcaaaaattagagattttaagaaaggattacaaagatcaaatggac
aaattgaatgttgagttggtgactgctcagcaaaatactgacaagctgaaaaaagatttg
ttggaacttgaaaattacataaaacagaaggattgcgagtttactgaggtaagaactgaa
aatgaaactctcttatgtttacaaattagtaaagacaaagaaataaatgacttagtggaa
ggtagaaaaaagcaagagactgaaatccaagaactcagacaatcgagagagagtttattg
gaagaattaaacagacttcatataacggctgaccatgaaatgaagtgcttaagggaagag
cttcagactcttgaacaaagtcatctgaaggatcttgaagatgacctgaaagtcaggcat
catcaagaattgaaaaaattactggctgatcatagcaagcaacaagaacaaatctcaaag
gaaaatgaagcaaggttagatcatgtgcagcagtctcttacaatcaagctccaggaacga
gagcaagaactaaatgaacttaaattgaacgtatctgaactttctgactctaggtgcaat
ttggaagctgaattggctttgaaagaagtggaaactgagaaattaaagcagcgtttgaaa
gagactcaagtccaacaagaggagattgcaaaatgtcaagtcatgaaagaaactgagaaa
tatagagaagagataactgacttgaagcaccaactccagctaaaacttgaggaatacaag
gtaggccttgcagaagaaagaatactaatgactacagagaaagatcagtgtatttctgat
ctgctagacaggcaagaacaggagaaggccatacttaaagcagaactagataagttggat
gtaatgagacagcaagcactggacatggaggtagcattaaggggacaagttgaagagctc
accactaaactcaaagaatgtttgaaaacaatggaaaccgaaagagaggaaatgatgtct
gaaaaacagcgaattgcatttgaaatagaagcaaaatataaagcaactattcatgatctt
gaagaggagaaggaacagctgctcaacaccagcctggaaagagaggaatttatgagaagt
aaaatgcatgaagattgtgagtgcaaaaaacaagcacttgagcaagaattgcaaataaaa
aatcaacagtctgaaagaccacttgaagatcaaagtagagctgagagctatgatccagtt
tcatctacatcagtaaaatggacccctccagcaagtgccattgctgacctgacaggaaaa
tttcaagaagagaaggccaacttactagaccaactagaaaaaaggaatgaagaacttcag
agccttaaaacatcactgatagctgaacaacagactaacttcaatacagtcctaactcga
gaaaaaatgaagagagaacaaattattactgagttgaatgacaaactgagaaagctaacc
cagcagcaagaaaaagatagagttttgatagaaaccctttctgcagacagagctacttta
ctacaagaaaagaaacagcttgatgaggagctgaacagactgcgaagtaatgcacttgtt
tgttctacctttccatcacctggaacttctggagctgagtcctcggttcctgggcctgac
attccatttgattcagaacgacttgcacccgctgctgcagtagcagaagaaataaggata
gaatctgcaatggaagcaagcactatgactgtacgtgaaaccatccaaatgtctgaagaa
aaacataggattatgattttagaaagaacattacaaatgaaagaagaggagaataaacgt
ttaaatcaaagattgatgtctcagagcatgtcttctgtatcttccagacattctgacaaa
atagctattcgagatttccaagttggggatttagtacttattatcttggatgaacgtcat
gataactacgttctatttaccgttggcccaaccctttatttcttacattcagagtcactg
ggagcactagatcttaagccagttccaggttcttccaggaggccttgggtactgggaaaa
gtgatggaaaaagaatattgtcaagctaaaaaggctcaaaacagatttaaagttcctctg
ggaacaaaattctacagagtgaaagcagtaccctggaacaagaaagtataa
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integrated database retrieval system
