Hemiscyllium ocellatum (epaulette shark): 132814359
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Entry
132814359 CDS
T09720
Name
(RefSeq) general transcription factor IIE subunit 1-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132814359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hoc03021
]
132814359
Transcription machinery [BR:
hoc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
132814359
Prokaryotic type
Archaeal type
TFE
132814359
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Zn_ribbon_Elf1
Cas12f1-like_TNB
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-GeneID:
132814359
NCBI-ProteinID:
XP_060679571
LinkDB
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Position
1:87260399..87273217
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AA seq
418 aa
AA seq
DB search
MDQNAITEVPASLKRLAKYIVRGFYGVEYSLTLDILIRYPCVKEDDLQQLLKFEKKQLRS
VLNTLKSDKFLKSRIRVETNSDGKSSRHNYYYINYKLLVDVVKYKLDIMRRKIETDERNS
STRSSFKCPLCFSTFTDLEVNHLFDPCTGNFNCTYCHTEVEEDASAIPKRDARTLLATFN
EQIEPIYALLRETEDIALPHELLEPQPTEIPELAISQNPKTHGLKSNDRPERWSNKAVCN
DLYEQNIVVNVQESDAKSKKKTVKPVKSQPIWMTASTVEGVGLDKKENSVEHTTSEMLDE
DAALNSKVPNSEVIKTLMIHEKKSLTGATFTSSANRSEPDSETSESEDESKNAKPPTKLD
AKEEENEFVLEKSTVMVAGKLHLYSEVSQNPELVSLMTEKERERYISISQEMFHLMYD
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaaacgcgattacggaagtccctgcatctctcaaacgcttagcaaagtacata
gtgcgtggattctatggggtggaatattccctcactctggacattctcattcgctatccc
tgtgtgaaggaggatgacctgcaacaactcttgaagtttgagaagaagcagctccgctct
gtcctcaacaccctaaaatctgacaagtttcttaagagccgaatacgggtggaaaccaat
tctgacgggaagagttccagacacaattactattacatcaactacaagctgctggtggac
gtggtcaaatacaaactggatataatgcgcagaaaaattgaaactgacgagaggaattca
agcacaagatcatctttcaagtgtccgctctgtttcagtacatttactgatttggaagtc
aatcatttgtttgacccttgtacaggcaattttaactgtacatactgtcacacggaggta
gaagaagatgcttctgcaatacctaaacgtgatgctcgaacacttctggcaacgtttaat
gaacaaattgaaccgatttatgcacttttacgtgaaactgaagatattgctcttccacat
gaactcttagaaccacaaccaactgagatcccagaactggcaataagtcagaatccgaag
acacatggccttaaaagtaatgatcgtccagagagatggtcaaataaagcagtttgcaat
gatctgtatgaacaaaacattgttgtaaatgtccaagaatctgatgctaaatctaagaaa
aaaactgtgaagcctgttaaatcacagcccatctggatgactgcaagcactgttgaggga
gttggtttggataaaaaggagaattcagttgaacacaccacatctgaaatgcttgatgaa
gatgcagctctgaatagtaaggttccaaactctgaggtcataaaaacactgatgattcat
gagaaaaaatcattaactggagcaaccttcacttcaagtgcaaatcggagtgaaccagat
agtgagaccagtgaatcagaggatgaatcgaagaatgcaaaaccaccaacaaaattggat
gcaaaggaagaggaaaatgagtttgtactagagaaatcaacagttatggttgctggaaaa
ttgcacctgtacagtgaagttagtcaaaatcctgaattagtatctttgatgaccgaaaaa
gaacgagagcgttacattagtatttctcaagaaatgttccatttaatgtatgattaa
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