KEGG   Hemiscyllium ocellatum (epaulette shark): 132815020
Entry
132815020         CDS       T09720                                 
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8
  KO
K10570  DNA excision repair protein ERCC-8
Organism
hoc  Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03420  Nucleotide excision repair
hoc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:hoc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    132815020 (ercc8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    132815020 (ercc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hoc04121]
    132815020 (ercc8)
   03400 DNA repair and recombination proteins [BR:hoc03400]
    132815020 (ercc8)
Ubiquitin system [BR:hoc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     132815020 (ercc8)
DNA repair and recombination proteins [BR:hoc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      132815020 (ercc8)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EML WDR90_beta-prop_4th Beta-prop_TEP1_C WD_LRWD1 NBCH_WD40 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_RIG_1st Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_LRRK2 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_Nup120_160 Nucleoporin_N Beta-prop_IFT140_2nd PBP1_XylR
Other DBs
NCBI-GeneID: 132815020
NCBI-ProteinID: XP_060679644
LinkDB
Position
1:complement(80956127..81042448)
AA seq 400 aa
MLALLAARQSGCDDPLRVRRAECTRRIVNLELNKDRDVQRIHGSGINSLDIDPVDGKYML
SGGSDGIIAIYDLENVTKKLQYTCKAICTVGRSHSHVHKYSVETVQWYPCDTGMFTSSSF
DKTLKIWDTNRLLPAEVFSFEGTVYCHHMSPIATKHCLIAVGTKNPKVQLCDLKSGSCTH
ILQGHRGEILSVKWSPRYEHILVTASADSKVRIWDVRKASGSLILLDQHNGEIAKSSSEA
ANTAHNGRVNGLCFTSDGLHLLTIGTDDRMRLWNSSTGHNTLVNYGRVSNESRKGLKFTV
STGCSPDFAFVPVDSCIAVYDIYSGQLLTELRGHYNYVNCCTIQSDFQELYSGGSDVNIL
AWIPDLGRTSVENDEPKGSAVGTSQSLTFQDDWSSSDEEN
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgctggccctcttggcagctcgtcagagcggttgtgatgatccgctgcgagtgaggaga
gccgaatgtacgagaaggatagtaaacttagaattgaacaaagaccgggatgtgcagaga
atccatggaagtggaattaatagccttgacattgatcctgttgatggaaaatacatgctg
tccgggggatcagatggcataattgcaatatacgatttggagaatgtcactaaaaaacta
cagtatacgtgcaaggccatttgtacagtgggcaggtcccatagccatgtgcacaaatat
agcgtggagactgttcagtggtatccttgtgacactggcatgtttacatccagctcgttt
gataaaactttgaaaatatgggacacaaacaggcttttgcctgctgaagtgttcagcttt
gaaggaacagtttactgtcatcatatgtcaccaattgcaaccaaacactgcctgatagct
gttggtaccaagaatcctaaagtacagctttgtgatcttaaatctggatcctgcactcac
attctgcaaggccacagaggtgaaatattatctgtgaaatggtcaccacgctatgagcac
atccttgtaacagcgagtgctgatagcaaagttaggatctgggatgtgcgaaaagcttct
gggagtttaattttgctcgatcaacataatggtgaaattgctaaatcatcttcagaggca
gcaaatactgctcataatggacgtgttaatggtctgtgctttactagtgatgggcttcac
cttttaactattggcacagatgatcgcatgagactctggaatagttccacaggacacaat
actttggtaaattatggaagggtatctaatgaaagccgtaaaggtctcaagtttaccgta
tccactggatgcagcccagattttgcttttgttcctgttgacagttgtattgctgtgtat
gacatctactctggacaactgctaactgaactccgaggacattataattatgtaaactgc
tgcacaattcagtctgatttccaagaactttacagtggtggcagtgatgttaatatttta
gcgtggattcctgatcttggacgaacaagtgtggaaaatgatgaacctaaagggtctgca
gttgggacttctcagagcctcaccttccaggatgattggagcagcagtgatgaagaaaac
tga

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