Hemiscyllium ocellatum (epaulette shark): 132815020
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Entry
132815020 CDS
T09720
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8
KO
K10570
DNA excision repair protein ERCC-8
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03420
Nucleotide excision repair
hoc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132815020 (ercc8)
09124 Replication and repair
03420 Nucleotide excision repair
132815020 (ercc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hoc04121
]
132815020 (ercc8)
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132815020 (ercc8)
Ubiquitin system [BR:
hoc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
132815020 (ercc8)
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
132815020 (ercc8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_TEP1_C
WD_LRWD1
NBCH_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_RIG_1st
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Nucleoporin_N
Beta-prop_IFT140_2nd
PBP1_XylR
Motif
Other DBs
NCBI-GeneID:
132815020
NCBI-ProteinID:
XP_060679644
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All DBs
Position
1:complement(80956127..81042448)
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AA seq
400 aa
AA seq
DB search
MLALLAARQSGCDDPLRVRRAECTRRIVNLELNKDRDVQRIHGSGINSLDIDPVDGKYML
SGGSDGIIAIYDLENVTKKLQYTCKAICTVGRSHSHVHKYSVETVQWYPCDTGMFTSSSF
DKTLKIWDTNRLLPAEVFSFEGTVYCHHMSPIATKHCLIAVGTKNPKVQLCDLKSGSCTH
ILQGHRGEILSVKWSPRYEHILVTASADSKVRIWDVRKASGSLILLDQHNGEIAKSSSEA
ANTAHNGRVNGLCFTSDGLHLLTIGTDDRMRLWNSSTGHNTLVNYGRVSNESRKGLKFTV
STGCSPDFAFVPVDSCIAVYDIYSGQLLTELRGHYNYVNCCTIQSDFQELYSGGSDVNIL
AWIPDLGRTSVENDEPKGSAVGTSQSLTFQDDWSSSDEEN
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgctggccctcttggcagctcgtcagagcggttgtgatgatccgctgcgagtgaggaga
gccgaatgtacgagaaggatagtaaacttagaattgaacaaagaccgggatgtgcagaga
atccatggaagtggaattaatagccttgacattgatcctgttgatggaaaatacatgctg
tccgggggatcagatggcataattgcaatatacgatttggagaatgtcactaaaaaacta
cagtatacgtgcaaggccatttgtacagtgggcaggtcccatagccatgtgcacaaatat
agcgtggagactgttcagtggtatccttgtgacactggcatgtttacatccagctcgttt
gataaaactttgaaaatatgggacacaaacaggcttttgcctgctgaagtgttcagcttt
gaaggaacagtttactgtcatcatatgtcaccaattgcaaccaaacactgcctgatagct
gttggtaccaagaatcctaaagtacagctttgtgatcttaaatctggatcctgcactcac
attctgcaaggccacagaggtgaaatattatctgtgaaatggtcaccacgctatgagcac
atccttgtaacagcgagtgctgatagcaaagttaggatctgggatgtgcgaaaagcttct
gggagtttaattttgctcgatcaacataatggtgaaattgctaaatcatcttcagaggca
gcaaatactgctcataatggacgtgttaatggtctgtgctttactagtgatgggcttcac
cttttaactattggcacagatgatcgcatgagactctggaatagttccacaggacacaat
actttggtaaattatggaagggtatctaatgaaagccgtaaaggtctcaagtttaccgta
tccactggatgcagcccagattttgcttttgttcctgttgacagttgtattgctgtgtat
gacatctactctggacaactgctaactgaactccgaggacattataattatgtaaactgc
tgcacaattcagtctgatttccaagaactttacagtggtggcagtgatgttaatatttta
gcgtggattcctgatcttggacgaacaagtgtggaaaatgatgaacctaaagggtctgca
gttgggacttctcagagcctcaccttccaggatgattggagcagcagtgatgaagaaaac
tga
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