Hemiscyllium ocellatum (epaulette shark): 132815025
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Entry
132815025 CDS
T09720
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132815025 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132815025 (rad54b)
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
132815025 (rad54b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
132815025
NCBI-ProteinID:
XP_060679653
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Position
4:complement(100430935..100636094)
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AA seq
949 aa
AA seq
DB search
MRRSAAPSQLSGNAAKRFKFIPPGVRGPASATASLPARSQVPHENDNNESSSLQSKALIE
KYELVQSCPPHQITGNKNENDHLKRSESDHLNAVPTLSVESASTSQAGFVPQQQLKPSRL
FAVPKQIRTSLPLVSHQTNQENHDENNVSSSFTTYYSVLWCKASKKKHKKWEGDAVLIVR
KTSAVLKDMEGKDIGKGTGYKAKELEALSEGQTLMLGGKEIEIMGPISVDDFMSGRCFHS
TVAGSSHVPMPTFSQQPSLKPFTNPLKNSAGSSQTEIVQKTRIDCKPRHDPNAPNALVMP
RPNLSHQWLFNKAGLPLVDVVVDPYLAVHLRPHQWDGVIFLYECIMGMRTAGRFGAILAD
EMGLGKTLQCITLIWTLMRQGPYGNKPVIKKTLVITPGSLVKNWVSEFQKWLGMERLRVF
AVDQDHKVEDFINSPLYPVLIISYEMLLRCLEQIQGFEFNLIICDEGHRLKNSSIKTSTA
ILSLSCDRRVILTGTPVQNDLQEFYSLIEFVNPGIIGSSSTYRKIYEEPIIKSQQPSATK
DEKQLGEERATELCRLTGFFILRRTQDIINNYLPPKTEWIVFCRPAVLQLELYHKLLASH
AVKSCLQGSLENSSHLICIGLLKKLCNHPTLFFKSIKGKENLCKTTDFDHQLESSPYDDL
TGIFPINYEPAAFTAKDSGKLQVLIDLLASIHEQNSAERVVLVSNYTQTLDVLQEMCKCF
GYSYTRLDGQTAVSHRQNIVDSFNNKHSQTFIFLLSSKAGGVGLNLIGASRLVLYDIDWN
PANDVQAMARVWRDGQKRPVHIYRLLTTGTIEEKIYQRQVSKQSLSGTVVDLKKKSEHAS
FSLEELRNLFQLEEDTNCLTHDLLYCNCLRNGQPIDNLSTKNAATPRACQLGHTSKRSDA
QKHLSMSDLMFWKHFSGGTQHFPDPVLEKVKENITFIFQNTTKPSAISS
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgcggaggtctgcagctccgagtcagctcagcggcaacgcagctaaaaggttcaagttt
atcccccccggggtcagggggcctgcttcagcaaccgccagtctccccgcaaggagtcag
gtacctcatgaaaatgacaataatgagagttcttcattgcaatccaaagcattgattgaa
aaatatgaactggttcagagctgtcctcctcaccaaattacaggaaataagaatgaaaat
gatcatctaaagagatctgaatctgaccatctgaatgccgtacctactttgtcagtggaa
tcagcaagtacaagtcaagctggttttgttccacagcaacagctgaagccatcccgactc
tttgcagtaccaaaacaaattcgcacatcactgccacttgtgtcacatcagacaaatcaa
gaaaatcacgatgaaaataacgtgtccagttcattcactacatactatagtgtcttgtgg
tgtaaagcatcaaagaaaaaacacaagaaatgggagggggatgcagtcttgattgtcaga
aagacgtctgcagttctcaaggacatggagggcaaagacatcggaaaaggtactggatac
aaagcaaaagaacttgaagctctttctgaaggccagaccttaatgcttggtgggaaagag
attgagataatgggaccaatctctgtggatgactttatgagtggccgctgttttcactcc
acagttgccggttcatcacatgtaccaatgccaactttttcacaacaaccttcgctaaaa
ccttttacaaacccattgaagaacagtgctgggtccagtcaaacagaaattgttcaaaaa
accagaattgattgtaaacctaggcatgatccaaatgcgccaaatgcgttagtaatgcca
cgaccaaaccttagtcaccagtggctgtttaataaagctggtctcccattagtggatgta
gtggtggatccttaccttgctgtgcacctacgacctcaccaatgggatggtgtgatcttt
ttatatgagtgcataatgggaatgagaacagctggcaggtttggtgctatcttggctgat
gaaatgggtctagggaaaactctgcagtgcattacattaatttggactctgatgcggcaa
ggaccttatggaaacaaacctgtaatcaaaaagacccttgtcatcacaccagggagtctc
gtaaaaaactgggtcagtgaattccagaaatggcttggaatggaaaggctgagggttttt
gcagttgatcaggaccacaaagtggaagacttcatcaattctccgctgtaccctgtcctc
ataatcagctatgagatgttactgcggtgcttagaacaaattcaaggctttgaatttaac
ctgataatttgtgatgaaggtcaccgtttaaaaaatagttcaattaagacatccacagca
attcttagcctctcttgtgacagaagagtgattctcactggtactccggtacaaaatgat
cttcaagagttttactctctaatagagtttgtgaatccaggaatcattggatcctcttcc
acctacagaaagatttatgaagagcctatcatcaaatctcaacagccatctgcaacaaaa
gatgaaaagcaattgggtgaagagagagcaactgagctctgccgattaactgggttcttt
atacttcgacggacacaggacatcattaacaattacctccctccgaagactgaatggatt
gtcttctgccgtccagctgtattgcagcttgaactttatcacaaactgctggcatcccat
gcagtgaaatcttgcctacagggtagtttggagaacagctcccacttaatatgcataggg
ttactgaaaaaactctgcaatcatcctacactcttctttaaatcgattaagggaaaggaa
aatctctgcaagacaactgattttgaccatcagttggaaagcagcccttatgatgatctg
actgggatatttccaataaattatgaaccagctgcattcactgcaaaggattcagggaaa
ctacaagtattgatagatcttttggcaagcattcatgaacagaattcggctgaaagagtt
gtgctggtttcaaattatactcagacattagatgtactgcaagaaatgtgcaagtgtttt
gggtatagctatacccgactggatggacaaaccgcagtcagccaccgacaaaacattgtg
gattcatttaataacaaacacagccagactttcatcttcctgctcagctcaaaggctggc
ggagttggattaaatctaattggagcatctcggttggttctatatgatatcgattggaat
cctgcaaatgatgttcaggctatggctagagtatggagagatggtcaaaagagacctgta
catatttacagactactaacaacagggaccatagaagagaaaatttatcagcggcaggtc
agtaaacaaagtttgtctggaacagtggttgacctaaaaaagaagagtgagcatgccagc
ttttctttagaagaacttcgaaatcttttccaattagaagaggatactaattgtcttacc
catgacctcctgtactgcaactgcttgagaaatggacagccaatagataatctctctact
aaaaacgctgcaactcctagagcctgtcaacttggccatacttcaaagaggtctgatgcc
caaaaacacctctctatgtcagatctgatgttctggaaacatttttctggaggaactcaa
cacttccctgatcctgttcttgaaaaagttaaagaaaatatcaccttcatctttcaaaac
acaacaaaaccatcggccatatccagctga
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