Hemiscyllium ocellatum (epaulette shark): 132815118
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Entry
132815118 CDS
T09720
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132815118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hoc03021
]
132815118
03036 Chromosome and associated proteins [BR:
hoc03036
]
132815118
Transcription machinery [BR:
hoc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132815118
Coactivators
SAGA/TFTC/STAGA complex
132815118
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
132815118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
132815118
NCBI-ProteinID:
XP_060679879
LinkDB
All DBs
Position
4:complement(138314711..138452147)
Genome browser
AA seq
801 aa
AA seq
DB search
MPTPNVPRREAESGGGGLPVPASSTPSNNNNDSSQAGSCPPPPQNGPGPEPGPAGTPASS
SPAASLPQPQPQPPVPAPSPAPTPLRVMPLPERQNQAGPQPAPQPRPLSGGGGGGGGMPP
SPALMKTAAVTTSTAAAAAAAATGSPLPASRAPTVTVQRISVSSPHIKTSAPLNQVTVPL
LQNLQVPAGMVLVRSDSGQLVLVPQKVIAQAQAKARAQGAGNISSAVSTGTPSVRISTVQ
ATGTQRIPNQVKTSTQQMNQFQAGGQTNAAPQRITVVQQQAAGGAIMPKTVSTIVQKQTS
APADRSVSVPVAQTTASPETLENVKKCKNFLATLIKLASSGSQSAQMSSNVKALVQKLLD
GKMEVEEFTEQLYKELKSSPQPYLVPFLKRSLPDLRKLMPNSQAFIQQCLQKPATPAAPI
AASSGGSKQVSTGQASKSITVMSASQPAKVLQTLPSSQMVVQQSGVVIKSQASPLPKTQT
VTLQKPPNHIIVPVSQNQAKETKAGAATLVTKVTLSQVNKNPTNVLIRASPGQILKKEAG
GTTFREEDDINDVASMAGVNVNEERARILATNSELVGTIIRSCKDEAFLSSASLQRKALE
IGKTHGVTEVNSDVLSTISHATQEHLRELVEKLTVIAQHRMMTYKDNDRYSLLNDTRSQL
KFFEQLDRLEKQRKDEDEREALLRLAKSRAKHEDPEQLRLKQKAKEMQQLELAQLQQREA
NLAALAAIGPRKRKMPDSPGLRTGNEGLGGSGNAPGGLRATPARPYLRQRVTRVNLRDLI
LCLEQDQARKHSLLLYRAYLK
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccccgaatgtcccgcggcgagaggcggagagcggcggcggcggcctccccgtc
ccggcctcctccaccccctccaacaacaacaacgacagttcccaggccggctcatgccca
ccgccgcctcagaacgggcctgggcccgagcccggtccagcggggacaccggccagctct
tcacccgccgcctcccttccccagccccagccgcagccgccggtcccggctccctctcct
gcaccgacccctctccgagtcatgccgctacccgaacgtcaaaatcaggccgggccccaa
cccgctcctcagccccggcccctctcaggaggaggaggaggaggcggcgggatgcctccc
tccccggcgttgatgaagaccgcggcggtaaccaccagcacggcggcagctgcagcagca
gcagcaaccgggagcccgctcccagcctccagggctcctactgtcaccgtccaaaggatc
agcgtctcttccccgcacatcaaaacctctgccccgctcaaccaggtcacagtccccctc
ctgcagaacctccaggtgccagcaggcatggtgcttgttcgaagtgacagtggacagtta
gtgttagttccacagaaagtcattgctcaagcccaggctaaagcccgagcacaaggcgct
ggaaacatctcatctgcagtatctactggcacaccctcagtccgaatttctaccgtacag
gcaactgggacccagaggattcccaatcaagtgaaaacctctacccagcaaatgaaccaa
ttccaagctggaggccagacaaatgctgcaccacaacgcatcacagtcgtgcagcaacag
gctgcaggtggagcgattatgccaaagactgtatcaacgattgtccaaaagcaaacatcg
gcaccagcagaccgttccgtcagtgtgcctgttgcgcagacaactgcttctccggaaact
ttggaaaatgtgaagaaatgcaagaacttccttgcaacattaattaagctggcttccagt
ggctctcagtcagcacaaatgtctagtaacgtgaaggctttagtgcagaaactgttggac
ggaaagatggaagtagaggaattcacagaacaattatataaagagcttaagtcctcacca
cagccttatcttgtgccttttctcaagcgaagtttaccagacttgcggaagttgatgccg
aattctcaggctttcattcaacagtgcctacagaaacctgcaactccagctgctcccatt
gcggcttcgtctggagggtcaaaacaagtcagcacagggcaggcatcaaagagtatcaca
gtaatgagtgcttcacagccggccaaagtcttacagactctgccatcgtcacagatggtt
gtccaacagtctggagtagtaataaagtcacaagcaagccccctgccaaagacccagaca
gtgactttgcaaaaacccccaaaccatatcattgtccccgtatctcaaaatcaggccaaa
gaaactaaagcaggtgctgcaacattggtcacaaaagtaacgctctctcaagttaacaaa
aatccaacgaatgttctaatacgagcctcgcctggtcaaatactaaaaaaagaagctgga
ggcacaacgttcagggaggaggatgacatcaatgatgtggcctccatggctggggttaac
gtcaatgaagagcgcgcacgcattcttgcaacaaactcagaattggtgggcactattatc
cggtcctgtaaagatgaagcatttctctcctctgcatccctgcagagaaaagctttggaa
atagggaagacgcacggtgtgaccgaggtgaattctgacgttttgagcaccatatctcat
gccacgcaagaacacttacgggaactcgtggaaaagctcacagtaattgcacagcatcgg
atgatgacgtataaggacaatgaccgatacagcctattgaatgatactcggtcacaactg
aagttttttgagcagttggatcgactggagaagcagcggaaagatgaagatgaaagagaa
gcactgctaagattagcgaagagtcgagccaagcatgaagacccagaacaacttaggtta
aagcagaaagccaaagagatgcaacaattagaacttgcgcagctgcagcaacgggaagca
aatcttgcagcactggctgccatcggaccaaggaaaagaaaaatgcccgattcaccaggt
ctccgaacaggaaatgagggcttgggcggcagtgggaatgcgcctggtggtcttcgagcg
acaccagcccgaccctacctacggcagagggtaacacgagtcaatctcagggatctcatc
ctgtgcttggagcaggaccaagcaaggaaacactcactgcttctgtaccgagcctatctc
aagtga
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