Hemiscyllium ocellatum (epaulette shark): 132815243
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Entry
132815243 CDS
T09720
Symbol
col22a1
Name
(RefSeq) collagen alpha-1(XXII) chain
KO
K16630
collagen type XXII alpha
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
132815243
NCBI-ProteinID:
XP_060680041
LinkDB
All DBs
Position
4:complement(117386508..117663797)
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AA seq
1593 aa
AA seq
DB search
MVLRAMSQVSVIIIILLLWTGEETNAQRAGCKNVHYDLVFLLDTSYSVGKENFEKVRQWV
ANLAGTFDIGPDKTRVGVVSYSDKPHTEFNLGTYQNIENIKQAAAGIRYRRGNTVTGEAI
GYVTLNSFSQQAGGRPNDPNIQKVVILLTDGRSQDEVLPNATLAHSTGIRLFAVGVGDAL
KEELEEIASEPKSAHMFHVTDFNAIDKIRGVLRQRLCQNVLCPNLRLEGSQYKLQNKASA
NIPGFDLMEQFHVKSIVGTKDGGFVRLGTMPIVQMTKDVFPQGLPDEYAFVATFKFRKTS
RREDWYIWQIIDKYGIPQVSIRLDGENKAVEYNAVGLRTDAVRTVFRNKEVSSLFDRNWH
KLALSIKSSSVSLYIDCKLIETLPMEERENINIRGKTVIGKRLYDSVPIDFDLQRIVIYC
DAKDAELETCCDLPSNPCQITLATQHPHLEILTTPQPPAEVDSTKTINCSCLKGEKGDRG
LPGFGHRGPKGEPGQVGADGPKGQKGEPGIIGYDSWEKGEKGIIIGFPGLPDVERAKGEK
GDPGPRGQIGPIGLKGEKGDQGYPGEQGFRGIAGPPGIKGEEGQRGSPGEKGERGFDGFP
GKAGLPGEVGATGSPGIPGTSGAKGEKGEAGPPGYPGSVVELDGLKGEPGQPGLRGHPGL
PGPPGPLGRPGLDGSAGKPGLQGQRGRKGDRGLPGLQGIAGPPGPKGDPGAPGLTGRPGE
QGLPGEIGFPGKPGPIGKPGPPGIDGKNGFPGPPGVKGEAGDHGLDGIPGKPGEMGESGI
PGMTGPSGPKGETGLPGQPGLPGPKGMNGEQGEPGRQGLVGPKSEKGEKGDKGSTGLPGS
PGLPGTSTEGFPVPGIPGLDGEKGEKGSPGEPGEPGSHGTPGTTGAQGPPGPKGQQGDQG
RSGISGVKGEMGIPGRPGPPGPHGVPGNVGVPGVAGSPGKNGPPGEKGMPGADGEPGSPG
IPGPPGVPGLSGEGKTGKPGQPGIPGSVGPQGPKGDPGEPGLPGLPGDRGLPGEGNPGPP
GAAGQPGDRGHPGPRGSPGTPGQPGSDGLPGPRGDPGPPGEPASLPLISRGQIEYMVQDL
CTSCPAGPPGLQGLPGLKGSKGHAGPRGKDGKDGLMGEPGPSGPPGPQGPAGMMGSKGDR
GLPGSSGEKGEQGSPGLPGYPGPPGTVGQPGADGIPGSPGAPGLRGEKGKEGARGSQGPT
GPIGPPGLPGKDGKDGKPGPAGEPGRQGNPGPPGRSGLRGMPGFKGSKGAPGSTGPRGET
GMAGSPGQPGSPGKDGEQGPPAPQGPPGLRGVQGKSGPPGPEGKPGPPGAEGPKGSKGSS
GDPGFPGPQGQPGTPGQQGEPGFTGKTGSPGKSGDRGSKGERGDPGTKGEKGIQGDKGRP
GDPGPPGIKGHTGIMGPVGPPGERGPVGLPGQSGPPGIPGERGEPPSSEVLRRLIREELS
KQLDVRLSYLMSQFPPTSIKAPPGKPGPPGPPGTDGFPGRPGVPGEPGSPGQPGSEGPSG
PIGPKGDRGSKGEKGETGIGQRGDPGTPGPAGIPGTPGYGKDGVPGTPGPPGESGLPGMI
GPQGPPGQNGICDLAQCAYYASMASRPANQKGP
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atggtccttcgagcaatgtctcaagtttctgttattatcataattctcttgttatggact
ggagaagaaacaaatgcacagagagcaggctgcaagaatgtccactatgacctggtcttt
ctgctggatacgtcctacagcgtgggcaaggagaactttgaaaaagtcaggcagtgggtg
gccaacttggcggggacgtttgatattggtccagacaagacgagagtaggggtcgtaagc
tacagtgacaagcctcacacagagttcaacttaggcacttaccagaacatagaaaatatc
aagcaggctgcagcgggcatcaggtatcgccgagggaatactgtgaccggagaggccatt
ggctatgtcaccttgaatagcttctcccagcaagctggtgggagacccaatgatccaaac
attcagaaagtagtcattcttttgacagatggcagaagtcaggatgaagtgttgcccaat
gccacattggctcactctactggcatcaggctgtttgctgtgggtgttggtgatgccctt
aaagaagaactggaggagattgcctcagaacccaaatcagctcacatgttccacgttact
gacttcaatgccatcgataagatccgaggagtgttgcgacaaagactgtgtcaaaatgta
ctatgcccaaatctaagattggaaggcagtcagtacaagttacaaaataaagcttcagct
aacatcccaggttttgatctaatggaacagtttcatgtgaaaagtattgttggaacgaaa
gatggaggatttgtccgccttggaacaatgcccatcgttcagatgaccaaagacgtgttt
cctcaaggtctgcctgatgaatatgcttttgttgccacattcaaattccgaaaaacttca
cgaagagaagactggtacatctggcaaattattgacaaatatgggattccacaggtttcc
atccgattagatggtgagaacaaagctgtggagtacaatgcggttggactgaggacagat
gctgtgaggaccgttttcagaaacaaagaagtcagcagcttatttgaccgcaattggcac
aagctggccctcagtattaagtcaagcagtgtctctctctacatcgactgcaaactgatt
gaaacgctgccaatggaagaacgggagaacatcaacattcgagggaaaaccgtgattggc
aaacgtctgtatgatagtgtcccaattgattttgaccttcaacggattgtcatatattgt
gatgccaaggatgcagaactggagacctgctgtgatcttcccagcaacccgtgtcagatt
actcttgccacacaacatcctcatttggagatcttaacaacaccacaaccacctgctgaa
gttgacagcacaaagaccattaactgttcctgtcttaagggagaaaagggtgatcgtggt
ctacctggttttggacacagaggtccaaagggtgaaccaggccaagtaggagctgatggt
cccaaaggacaaaaaggagaacctggtataataggctatgattcatgggagaaaggtgaa
aagggaataattattggttttcctggcctacctgatgtggaaagagccaagggcgaaaag
ggtgatccaggtccacgtggacagataggaccaataggcctgaaaggagaaaagggagac
cagggttatccaggagaacagggttttcgaggcatcgctggaccacctggtattaaaggt
gaagagggtcagagagggtcccctggagaaaagggagaacgcggctttgatggatttcct
ggaaaagcaggccttcctggtgaagtgggggcaactggtagtccaggaattccgggtact
tctggagcaaaaggagaaaaaggagaagctggacctccaggttacccaggcagtgtggta
gaacttgatggtttgaaaggagaaccaggtcagccaggacttcgtggacatccgggcttg
ccaggtcctccagggcctttgggtcgtcctggtttggatggcagtgctggaaaacctgga
ttacaaggccaaaggggaaggaagggtgatcggggactgcctggtttgcagggaatcgct
ggacctccgggtcctaaaggagatcctggtgctcccggactgacagggcggcctggagaa
cagggactgccaggtgaaattggctttccaggaaagccaggtccaattggaaaaccgggt
ccacctgggatagatggtaaaaatggcttccctggacctcctggagtcaagggagaagct
ggagatcatgggctagatggcatccctggaaagcctggtgaaatgggagaaagcgggata
ccaggtatgacagggcccagtggaccaaagggagaaactggtcttcctggacaaccggga
ctaccaggtccgaagggaatgaacggagagcagggagaaccagggagacaaggtttggtt
ggtccaaaatcagaaaagggtgagaaaggtgacaagggatctaccggacttcccggttct
ccaggcctaccggggacgtcaactgaaggttttcctgtgcctgggataccgggtttggat
ggtgagaaaggggagaaggggagcccaggagaaccaggagaacctggttcccatggaaca
ccaggaacaactggagcacaaggacctccaggtccaaagggtcagcagggtgatcaaggg
cggtctggaatctctggagtaaaaggtgaaatgggtattcctggaagaccagggccacca
ggaccacatggtgtgccaggaaatgtaggagttccaggagttgctggctctccaggcaag
aatggtcctccaggtgagaagggaatgcctggtgctgatggtgaaccaggatctcccgga
attccaggaccacctggagtccctggattatctggagaaggcaaaactgggaaaccggga
caacctggtatacccggctcagtggggccacaaggaccaaagggtgacccaggagaacct
ggtttaccagggttaccaggagaccgaggccttccaggtgaaggaaacccaggaccaccg
ggtgctgctggacaaccgggagatagaggccatccgggtccacgaggttcacctggaact
ccaggccaacctggaagtgatgggttaccagggcctagaggagatccaggacctccagga
gaacctgcatcattacctcttatttcaaggggacaaatagaatacatggttcaggatttg
tgcacgagttgcccagctggtccaccaggacttcaaggactaccaggtttgaaaggaagc
aaaggacatgcaggcccccgggggaaagatggaaaagatggtctgatgggtgaaccagga
ccatcagggccacctggaccacaagggccagcaggaatgatgggcagtaaaggagatcgg
ggtttgcctggttcatctggtgaaaagggcgagcagggtagtccaggactgcctggttat
cctggacctcctggaactgttggccaacctggagctgatggcattccgggatctcctggt
gccccagggctgcgaggagagaagggaaaggaaggtgctcgaggaagtcagggacctact
ggaccaattgggccacctggtcttcctggcaaagatggaaaggacgggaaacctggacct
gcaggggaaccaggccggcagggaaaccctgggcctcctggcaggagtggcctccgagga
atgcctggtttcaaaggctctaaaggtgctcctggttcaactggtccgagaggggaaaca
ggaatggctgggtcaccaggtcagccaggctcacctgggaaagacggtgaacaaggacct
ccggcacctcagggtcctcctggtttaagaggtgttcagggtaaaagtggtcctcctggt
cctgaaggaaaacctggtcctccaggtgctgagggaccaaagggttctaaaggatcaagt
ggtgacccagggtttccagggccccaaggacaaccaggaacaccgggacagcaaggagag
ccaggattcacgggaaaaacaggatctccaggcaaatcaggtgatcgggggtccaaagga
gaaagaggtgacccaggtaccaaaggtgaaaaaggaatccagggggacaaaggacgacca
ggtgatccgggtcctccaggtataaaaggacacactgggataatgggtcctgtgggacct
ccaggagaaagaggcccagttgggttaccaggccaatcaggtcctcctggaatacctgga
gaaaggggtgagcctccatcttctgaggtcctaaggagacttataagggaagagctgtca
aagcagctcgatgtgcggctgtcctatctcatgtctcagtttccaccaacttccattaaa
gcaccacctgggaagccagggccaccaggtccaccaggaactgatggatttcccgggagg
cctggtgtccctggagaacctgggtcacctggacaacctggctctgaaggacccagtggg
ccaattggtccaaaaggtgatagaggttcaaagggtgaaaaaggagagacgggtattgga
cagcggggtgatcctggtaccccaggccctgccggtatccctggaacacctggctatggg
aaagatggagttcctggtactccagggccaccaggagagtctggtctacctggaatgata
ggtcctcaaggaccccctggtcagaatggaatctgtgatctggctcagtgtgcttattat
gcaagtatggccagccgaccagctaaccagaaaggaccttga
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