Hemiscyllium ocellatum (epaulette shark): 132815258
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Entry
132815258 CDS
T09720
Symbol
smarcd3a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132815258 (smarcd3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hoc03021
]
132815258 (smarcd3a)
03036 Chromosome and associated proteins [BR:
hoc03036
]
132815258 (smarcd3a)
Transcription machinery [BR:
hoc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132815258 (smarcd3a)
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132815258 (smarcd3a)
PBAF complex
132815258 (smarcd3a)
GBAF(ncBAF) complex
132815258 (smarcd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
132815258
NCBI-ProteinID:
XP_060680055
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All DBs
Position
4:141324650..141373637
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AA seq
474 aa
AA seq
DB search
MDHEPEFIDGVFCKRSNDDVRKICFHSRPGVPAGARMAPQGSAMGPPGSPYGGSPTVRPG
IPQPVLDQTRKRSAPQPVQQVVQSRTRSAKRRKMSDKILPQRIRELVPESQAYMDLLAFE
RKLDQTIMRKRVDIQEALKRPIKQKRKLRLYISNTFNPARSETEDSDSSIASWELRVEGK
LLEDPGKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVSVR
CTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSAIVQALWQYIKTNKLQDSHDKEYISCDK
YFQQIFDGARLKFSEIPQRLTTLLLPPDPIIINHLISVDPNDQKKTACYDIDVEVDDPLK
GQMSSFLLSTANQQEIAALDNKIHETIESINQLKIQRDFMLSFSKDPEGYIQDWLRSQSR
DLKIMTDVVGSPEEERRADFYQQPWSQEAVSRYFYCKIQQRRQELEQAMGVRNT
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggatcacgagccggagtttatagacggagtgttttgtaaaagaagtaacgatgatgtg
agaaaaatctgttttcactcccgccctggggtgccagcgggtgccaggatggcaccccaa
ggatcggccatgggacctcccggctccccgtatgggggcagccccacggttcgcccaggg
atcccacagcccgtactcgaccagacccgcaagcgctcagctccccaacccgtacagcag
gtggtacagagccggacccgcagcgccaagagacggaagatgtcagacaagatcctcccg
cagaggatccgagagctggttcccgaatcccaggcctacatggacctcctggccttcgag
aggaaacttgaccaaaccatcatgaggaagagggtggacatacaggaggccctgaaaagg
ccaatcaagcaaaagcgaaagttgcggctctacatctcgaacacctttaacccggctcgg
agtgagacagaggactcggacagcagcattgcctcatgggaactccgcgtcgaggggaaa
ctcctcgaggatcctggaaaacagaaacggaagttctcctcgtttttcaagagccttgtt
attgagctggataaggatttgtacggaccagacaatcacttggtggagtggcaccgaaca
cccaccacccaagagacggacgggttccaggtgaagcgaccgggcgatgtcagcgtgcgg
tgtacgctgctgctcatgctcgactaccagcccccccagtttaagctggaccctcgcctc
gctcgtttactgggaatccacactcagacccgttcggccattgtccaggcgctgtggcag
tacatcaaaaccaacaaactacaggactctcacgacaaggagtacatcagctgtgacaag
tacttccagcagatatttgacggagcccggttaaagttctccgagatcccccagagactc
accactttgctgctgcccccggatccaatcatcatcaaccacctcatcagcgtggatccg
aatgatcagaagaaaacagcctgttacgatatcgatgtggaggtcgatgaccctctgaaa
ggtcaaatgagcagcttcctgctctccacagccaatcagcaggagattgctgcactcgac
aacaagatacatgagacgattgaatcgattaaccagctgaagatccagagggacttcatg
ctgagtttctccaaggacccggagggttacatccaggactggctcaggtcgcagagccgt
gacctgaagatcatgacggatgtggtcgggagtccggaggaggaacgccgggcggacttt
taccaacaaccgtggtcccaggaagctgtcagcagatacttctactgcaagatacaacag
cggagacaggaactggagcaagccatgggagtgcgcaacacctaa
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