Hemiscyllium ocellatum (epaulette shark): 132815457
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Entry
132815457 CDS
T09720
Symbol
nbn
Name
(RefSeq) nibrin isoform X1
KO
K10867
nibrin
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03440
Homologous recombination
hoc04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132815457 (nbn)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
132815457 (nbn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hoc03032
]
132815457 (nbn)
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132815457 (nbn)
DNA replication proteins [BR:
hoc03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
132815457 (nbn)
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
132815457 (nbn)
BRCA1-C complex
132815457 (nbn)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
BRCT
PTCB-BRCT
Yop-YscD_cpl
RTT107_BRCT_5
MU2_FHA
Motif
Other DBs
NCBI-GeneID:
132815457
NCBI-ProteinID:
XP_060680393
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Position
4:complement(96552503..96616481)
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AA seq
758 aa
AA seq
DB search
MWSLVSITSAGDKPYHLMVGVDYIVGRKNCAILLCDDQSISRSHAVLSVSHPAAHLTQVT
KNSVLILKDTSKYGTFVNEERLQHDSPRILKSGELVTFGLFQSKFRVEYEPLIVCSSCLD
GLEKIELNKSIQELGGHLSNNWTEANTHLVMSSVKVTVKTICAMICCRPIVKPEFFVSLI
RAIRNRQCLPSPESFSPPIDEPSIKPGELDITTKPERKSIFRGKTFIFLNEKQHKRLNSA
VILGGGDVKLVGNSTSDISFLEAPGNCVIDVGMSDSQTSGEKLIESVRRALQRKGLRVIS
EAEIGFAVIHNSTDIYCNPNRLLDQGIFSSSRTTIPGPTLSENFKMDEMTAPDTSQVIAY
VPDTQSRQEHSTSLLQWGKQFGSLNSAETLSGMNIDYTQVIKETPEKESKMESQDISVAR
ETSSMRPLLPADERPKNEMRQTFVTVDKKPFIPTTQKNLRKKSSLSSQKQSLSLHDFFQP
VGRKREREETGSSQAKFARTEEPSIPTDHHLNITDSSLENSDSKFIGQRTQCEYLSANHK
TGVSDQSLKETPRGVGEEETAKAIRKRKDPEDTNLKLPTDDQLEVTKRRRLEPEVLPFNR
NDESVTEDVNKACHAKTSPVKQESEVKHELPAPLDKKLNNNLDLLHESGNNETLPNRLLV
TVFKSLVVSQPGRGRILASNEENSQLKNFKKFKKVLFPGAEKLPKIIGGTDLKAYQTKKN
SEIEEWLRQEVEEQSHQLKEESLADDLFRYDPKSVRRR
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcgttagtgtcgatcacctcagccggagacaagccctaccatttgatggttggt
gtggattatatcgttggtcgaaagaactgtgcaatccttttatgtgatgatcagtccatt
agtcgttcccatgctgtactttcagttagtcaccctgctgcacatctgacccaagttacc
aaaaactctgtactgatattaaaagatacttcaaaatacggaacttttgtaaatgaagag
cgcttacagcatgatagcccacggattttgaagtcaggagaattggttacatttggcctt
ttccaaagcaaattcagagtagaatatgaacctttgattgtatgctcttcctgtttggat
ggactagaaaaaattgaactaaacaagtcaattcaagagcttggaggtcatcttagcaac
aattggacagaagctaacactcaccttgtcatgtcatcagttaaggtcactgtgaagacc
atatgcgcaatgatttgctgtcggcccatagtgaagccagaattctttgtcagtcttatc
agggcaattcggaatagacaatgtcttcccagtccagaaagtttctctccaccaattgat
gaacctagtatcaagcctggagagctggacattacaacaaagcctgaaagaaaatcgatc
tttagaggcaaaactttcatttttttaaatgaaaagcagcacaagaggctgaattctgct
gtaattcttggaggaggagatgttaaacttgtagggaatagtacctcagatatatcattc
cttgaagcaccaggaaactgtgtcattgatgttggaatgtcagattctcaaacttcagga
gaaaaattgattgagtcagtgaggagagctttgcaacgaaaagggctgcgtgttatatct
gaggcagagattggttttgcagttattcacaattcaacagatatttattgtaaccccaac
cggctgcttgatcagggaattttctcctcttcaagaacaacaattccaggtcctacactt
tctgaaaattttaaaatggatgaaatgactgctccagatacttcacaagttattgcatac
gtaccagatacacaatcaagacaagaacacagtacgagcctgcttcagtggggaaaacaa
tttggtagtctcaattctgcagagaccctgtcaggaatgaacatagactacacacaagtg
ataaaagagacacctgaaaaagaaagcaaaatggaatcacaggatatttcagtggccaga
gaaacatccagcatgagaccactgcttccagcagatgaaagaccgaagaatgaaatgaga
caaacatttgtcactgttgacaaaaagccattcataccaacaacacagaagaatctcaga
aagaaaagtagcctctcttcacaaaagcaatctctctcactgcatgatttctttcagcca
gtggggagaaaaagggaaagagaggagactggatcatctcaagctaaatttgcaagaaca
gaggagccaagtatacccactgatcatcacctaaatatcacagattcttcattggaaaat
agcgactccaagtttataggacaaaggactcagtgcgaatatctttctgcaaatcataaa
actggagtctctgatcagagtttaaaagaaacccctagaggagttggtgaagaagaaact
gcaaaggcaatacgaaaaagaaaagacccagaagacacaaatctgaagcttcctacagat
gaccagctggaagtgactaaaaggagaagactagaacctgaggttttacctttcaacaga
aatgatgagtctgtaacagaagatgtaaacaaagcatgtcatgcaaagacatcaccagta
aaacaggagtctgaagttaaacatgaattgcctgcaccactcgataagaagttaaataat
aatttggatttacttcatgaatctggaaataatgagactcttccaaacagacttcttgta
actgtgttcaagtcacttgttgttagccaacctggaagagggagaatacttgcctcaaat
gaagagaatagccagttgaagaactttaaaaaatttaaaaaggttttatttcctggagca
gaaaagcttcctaaaattattgggggcacagacctgaaggcttaccaaaccaaaaagaac
tctgaaatcgaagaatggttaagacaagaagtggaggagcaaagccatcaacttaaagaa
gagagtcttgctgatgacttatttagatatgacccaaagtctgtcagaagaagatga
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