Hemiscyllium ocellatum (epaulette shark): 132815690
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Entry
132815690 CDS
T09720
Symbol
rpa3
Name
(RefSeq) replication protein A 14 kDa subunit
KO
K10740
replication factor A3
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03030
DNA replication
hoc03420
Nucleotide excision repair
hoc03430
Mismatch repair
hoc03440
Homologous recombination
hoc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132815690 (rpa3)
03420 Nucleotide excision repair
132815690 (rpa3)
03430 Mismatch repair
132815690 (rpa3)
03440 Homologous recombination
132815690 (rpa3)
03460 Fanconi anemia pathway
132815690 (rpa3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hoc03032
]
132815690 (rpa3)
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132815690 (rpa3)
DNA replication proteins [BR:
hoc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
132815690 (rpa3)
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
132815690 (rpa3)
MMR (mismatch excision repair)
132815690 (rpa3)
DSBR (double strand breaks repair)
HR (homologous recombination)
132815690 (rpa3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_3
DUF5818
DUF7223
Motif
Other DBs
NCBI-GeneID:
132815690
NCBI-ProteinID:
XP_060680738
LinkDB
All DBs
Position
5:53842770..53859272
Genome browser
AA seq
121 aa
AA seq
DB search
MADDLEGPRTRINTSLVSQFTGKAVCFVGRVQKVHPSGTSFVLSDGDGKNVTVEMTDPLD
EELSGVIEVVGKITPKATIKAAYYAPFREDKSSFDLHLYNEALNIIHEFPQYYPFSVTAS
G
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgatctggagggtccgcgcacgaggattaacacgagcctggtctcgcagttt
accgggaaagccgtttgcttcgtgggcagagttcagaaggttcacccctctgggacttcc
tttgttctgtcagatggtgatgggaagaatgtaacagtagaaatgactgatccacttgat
gaggagttgagtggagtcattgaagtggttggaaagatcacaccaaaagccaccatcaag
gctgcatattatgctcctttccgagaggacaaaagcagttttgatctccatctttacaat
gaagcgctgaacatcatacatgaatttccacagtactatccctttagtgttacagcaagt
ggttga
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