Hemiscyllium ocellatum (epaulette shark): 132815704
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Entry
132815704 CDS
T09720
Symbol
vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hoc04131
]
132815704 (vps50)
Membrane trafficking [BR:
hoc04131
]
Protein recycling
Others
EARP complex
132815704 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
132815704
NCBI-ProteinID:
XP_060680762
LinkDB
All DBs
Position
5:complement(58707050..58899128)
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AA seq
965 aa
AA seq
DB search
MQKIKSLMSRQGLKSPQESVTEVKSPVENFRIPSKEEQRELREIPSDPQAEQEIINSIEE
IYFNNDSFDVVNYELEKLPSVLNLQDLEEYRDKLKQQQAAVSKKVADLILEKQAAYVKEL
ERVTSLQANLQLAAVICTNARRQLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKT
LQRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDV
ALSKTCKHFEVGHYTKVQLAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGN
SDTKFQKLQYKDLCTHITPDSYIPCLSDLCKALWEVMLSYYRTMSWHDEHDSEESAPAAD
GRTEISTDDANFNRSYVKKKLEHGLSRIWQDVQLKAKTYLLGTDLSSFKYDDFIFVLDII
SRLMQVGEEFCGSKSEVLQESIRKQSVNYFKSYHRIRLEELRMFLENETWELCPVKSNFS
ILQLHEFKFMRQSRSPSMSPSKQYTTTPVTTGSLFDQYQNGGNPFEHQADIKDDESEDVL
AANGYESDELEKSVYQDYDSDSDVPEELKRDYVDEQTGDIPVKSISKETLKGRKRSDYYL
NKGNTLILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCMSQLFDYYLYAVYTFFGREDM
YESTGLGLISSRLRTTLNRIQESLIDLEAPPETAGPLTATEERKEKVPSPHLSHLVVLNS
AETLYGLAERVVATESLVFLADQFECLQPHLDAMMPSAKKPFLQQFYSQTVSTASELRKP
IYWIVAAKAIDYEQMLHLMANVKWDIKEIMSQHNVYIDTLLKEFEQFNKKLSEVSKRVRI
PLQVSNVLWEHCIRLANRTIVEGYANAKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPD
KEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLMAAIDET
DRPKR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaataaaatcattgatgtcccgccagggtctgaaaagcccccaggaaagtgta
acagaggttaaatccccagttgaaaactttcgaatacccagcaaggaagaacaaagagaa
ttaagagaaattccaagtgaccctcaagcggagcaagaaataattaacagcattgaagaa
atttatttcaacaatgactcatttgatgttgtgaactatgagctggagaaacttccctct
gttctcaatctacaagaccttgaagaatatagagataaactgaaacaacagcaagctgct
gtatcaaagaaagtagcagatttaatccttgaaaaacaagctgcatacgtgaaggaactt
gaaagagttacatcattgcaggccaatcttcaactggctgctgtcatatgtacaaatgca
agaaggcagctaaatattgccaaggaaggctttacacaagctagcctggggttgcttgcg
aatcaaagaaagagacagctgttgattggactactgaagtctttacgcacaattaaaaca
ctgcaaaggacggacgtacgattaagtgaaatgttggaggaagaagattatcctggagca
atacaactctgtttggaatgtcagaaagcagctagcacattcaaacactacagctgcata
agtgaactgaattcaaaattacaagatacattggaacaaatagaggaacagttagatgtt
gcactgtcaaaaacctgcaagcactttgaagtcggtcattataccaaggtccaacttgct
tacagattgctgggaaaaacccagactgcaatggaccagctacacatgcacttcactcag
gctatccataacacagtcttccaggttgtacttggatacgtggaattgtgtgcaggcaac
tcggacaccaagtttcagaagctgcaatataaagatctttgcacgcatattactcctgac
agctacatcccatgcctgtctgacctctgcaaagctctgtgggaagtcatgctaagctac
tatcgcaccatgtcgtggcatgatgaacatgacagtgaagagtctgccccagctgctgat
ggccgtactgagatttccacagatgatgccaactttaatcgaagttatgtgaaaaagaag
ttggagcatggcctttctcggatctggcaggatgttcaattaaaagcaaaaacatatttg
cttggaaccgatttatccagtttcaagtatgacgattttatttttgtactggacattatt
agcagactaatgcaagttggtgaagaattttgtggcagtaaatccgaggtgttgcaggag
tctattcgaaaacaaagtgtgaattattttaaaagctatcacagaatacgccttgaagag
ctacgaatgtttttagaaaatgaaacctgggaactatgtcctgtgaaatcaaacttcagt
attttgcaattgcacgagtttaaatttatgcggcagtcacgttccccttctatgtcaccc
agcaagcaatatacaacaacgccagtcacaacgggatctctatttgaccagtatcaaaat
ggtggaaatccatttgaacaccaggcagacatcaaagatgatgaatcagaagatgttctt
gctgctaatgggtatgaatctgatgagttggagaaaagtgtttatcaagactatgatagt
gacagtgatgttccagaagagcttaaaagagactatgtggatgagcaaactggtgacatt
cctgtgaaaagcatctcaaaagaaaccctgaaaggtaggaagaggtcggactactatctg
aacaagggcaatacactcattttaacaaacactactctgaatgtaataaggcttgttgga
aaatacatgcaaatgatgaatatcctgaagccaattgcttttgatgttatccactgtatg
tcacaactatttgactattacttgtatgctgtatatacattttttggacgggaagacatg
tatgaatccacaggactgggactcattagcagcagattacgaaccacattgaatagaata
caagagagccttattgatctggaggcaccacctgaaaccgctggtcccttaacagcaaca
gaagagaggaaagaaaaggttccaagcccacacctcagccatctcgttgttttaaattct
gctgaaacactatatggtcttgcagaaagggtcgttgctacagaatctttggtatttcta
gctgatcaatttgaatgtttgcagccgcatcttgatgccatgatgccttcagccaagaag
ccttttttgcagcagttttattcacagactgtgtcaactgcaagtgagctgcgcaaacca
atttactggattgtggctgccaaagccattgattatgaacagatgctgcatcttatggct
aatgttaaatgggatatcaaagaaattatgtcacagcacaacgtatatattgatactctt
cttaaggagtttgaacagttcaataagaagctatctgaggtttccaaacgagtgcgtata
ccactgcaggtctctaatgtgctctgggagcattgtattcggctggcgaacagaaccatt
gtcgaaggttacgcaaatgcaaaaaaatgtagtaatgaggggcgtgctttgatgcagctg
gactttcaacagtttttaatgaagttggagaagctgacagacatcaggccaattccggat
aaagaatttgtggaaacctacattaaagcctattatttgactgaaaatgacatggaaaga
tggattaaagaacacagggaatattcaaccaagcagctaactaacctagtgaatgtttgt
ttgggctcgcatataaataaaaaagcacggcagaaactgatggcagctattgatgaaact
gacaggcctaaaagatag
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