Hemiscyllium ocellatum (epaulette shark): 132815806
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Entry
132815806 CDS
T09720
Symbol
pcdh7b
Name
(RefSeq) protocadherin-7b isoform X1
KO
K16498
protocadherin delta 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
132815806 (pcdh7b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hoc01009
]
132815806 (pcdh7b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hoc04515
]
132815806 (pcdh7b)
Protein phosphatases and associated proteins [BR:
hoc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132815806 (pcdh7b)
Cell adhesion molecules [BR:
hoc04515
]
Cadherins
Protocadherins
132815806 (pcdh7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Mid2
LYRIC
RIFIN
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
132815806
NCBI-ProteinID:
XP_060681038
LinkDB
All DBs
Position
1:complement(111858246..112239450)
Genome browser
AA seq
1246 aa
AA seq
DB search
MTFCFPLLLFVRTAAVLASAKQALRYRITEEGPADVRIGNVASDLGIVAGSGEVTFSLES
GSEYFKIDNITGELSTTGRRTDREKLPQCQMIFDENECFIDFEVSVIGPAQSWVDLYDGR
VVVQDINDNTPSFPSPVLTLTVEENRPVGTLYLLPTATDRDFGTNGIERYELLVPDESSG
PGGEAGRRAGGTSGSPEARGGGGGGSSVFELQVADTPDGDKQPQLIVKGALDRERRDSYE
LSLRVRDGGDPPRSSSALLRVLISDVNDNSPRFERGLYEAELAENSPPGTPVLQLRASDL
DAGVNGQIEYGFGAATEAVRRLLRLDEATGRLTVLHRPDREELSQLRFTVTARDRGQPAR
TDRATVSLRVRDQNDNAPRVDIRKIGRIVLRDGVAQVAEDVLVDTPVALVQVSDRDQGEN
GAVTCTVVGDVPFQLRPAGGGGGGGGDGGGGGGGGGEAADGEQRARKYFLHTSAPLDYEA
ARQYTVAIVAVDSGSPSLSGNNSLLVRVTDVNDNPPVFPQPLVRVSVAENNRPGEAVASV
RASDADDGKNAEVAYSLEPSPGGAGGAGGLFSIDPLKGDIVANAVLDREQTERYEFVVLA
RDKGSPSLQGSATVLLRVTDTNDNEPRFMQDVFTFYVKENLPPHSPVGMVTVMDADQGSN
AELTLRVQEDGGIFSIDNDTGTIYSTVSFNREQQTSYSFKVKAVDGGEPPRSSTAMVSLY
VMDENDNAPTVTFPKNASYTVLPPSSNLRTVVATVLATDRDTGINADLNYSIVGGNPFKL
FEIDPASGVISLVGKLTQKHYGLHRLIVQVNDSGQPSQYTTAMVHVFVNESVSNATVVEA
QIARSLRTSLKQDIAGDPNYEMSKQRLSIVIGVVAGVMTVILIILVVVLARYCRPKKSKN
GYEAGKKDPEDFFTPQQHDKSKKPKKDKKNKKSKQPLYSSIVTVEASKPNGQRYDSVNEK
LTESPGMGRYRSMNGGPGSPDLGRHYKSSSPLPTVQLHPQSPTAGKKHQAVQELPPANTF
VGTGDNISIESDHCSEYSCQINNKYSKQPFRRVTFSVVSQPQDPHQGSLQSCYDSGLEES
ETPSSKSSSGPRLGSLPLPEDNYERTTPDGSVGEAEHMENDSRPLPDVALTGKCTRECDE
FGHSDSCWMPVRTSPERRKKNPPKLSTFMPVADRGSQEKLANGAPQIIGDRNRNLLNKRL
TSSYENFNTATYAKNEEANPEDIPLTQTADFKPSSVSQLTRREVYL
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgactttctgcttcccgctgctgctgttcgtgcggaccgccgcggtgctggcgagcgcc
aagcaggctctccggtaccggatcaccgaggaaggtccggccgacgtgcggatcggtaac
gtggccagcgacctgggcatcgtggcgggctcgggcgaggtgactttcagcctggagtcg
ggctccgagtacttcaagatcgacaacatcaccggcgagctgagcaccaccgggcgccgc
accgaccgcgagaagctgccgcagtgccagatgatcttcgacgagaacgagtgcttcatc
gacttcgaggtgtcggtgatcgggccggcccagagctgggtggacctgtacgacggccgc
gtggtggtgcaggacatcaacgacaacacgccgagcttcccgtcgccggtgctcaccctg
accgtggaggagaaccggccggtgggcaccctctacctgctgcccaccgccaccgaccgc
gacttcggcaccaacggcatcgagaggtacgagctgctggtgcccgacgagagctccggg
cccgggggggaggcgggccggagagcggggggcaccagcggcagccccgaggcccgcggc
ggcggcggcggcggcagcagcgtcttcgagctgcaggtcgccgacaccccggacggcgac
aagcagccgcagctgatcgtcaagggcgccctggaccgggagcggcgggactcgtacgag
ctgagcctgagggtgagggacggcggcgacccgccgcgctcctcgtccgccctgctgcgg
gtgctcatctcggacgtgaacgacaacagcccgcgcttcgagcgcggcctgtacgaggcc
gagctggcggagaacagcccgcccggcaccccggtgctgcagctgcgcgcctccgacctg
gacgcgggcgtcaacggccagatcgagtacggcttcggcgcggccaccgaggcggtgcgg
cgcctgctgcggctggacgaggccaccggccgcctgacggtgctgcaccggcccgaccgc
gaggagctgagccagctgcgcttcacggtgaccgcccgggaccgcgggcagcccgcgcgc
accgaccgcgccaccgtctcgctccgggtccgcgaccagaacgacaacgcgccgcgcgtc
gacatccgcaagatcggccgcatcgtgctgcgggacggcgtggcgcaggtggccgaggac
gtgctggtcgacaccccggtggcgctggtgcaggtctccgaccgggaccagggcgagaac
ggcgcggtcacctgcaccgtggtgggcgacgtgcccttccagctgaggccggccggcggc
ggcggcggtgggggcggtgatggcggcggcggtggaggaggaggtggggaggcggccgac
ggcgagcagcgggcccgcaagtacttcctgcacacctcggcgcccctggactacgaggcg
gcccgccagtacacggtggcgatcgtggcggtggactcgggcagcccgagcctgtccggc
aacaactcgctgctggtccgggtcaccgacgtcaacgacaacccgcccgtcttcccgcag
ccgctggtgcgggtctcggtggcggagaacaaccggcccggggaggccgtggcctcggtg
cgcgcctcggacgccgacgacggcaagaacgccgaggtggcctactcgctggagccgtcc
ccggggggagccgggggcgcggggggcctgttctccatcgacccgctgaagggggacatc
gtggccaacgcggtgctggaccgggagcagacggagcgctacgagttcgtggtgctggcc
cgggacaagggcagccccagcctgcagggcagtgccaccgtgctgctgcgggtcaccgac
accaacgacaacgagccgcgcttcatgcaggacgtcttcaccttctacgtgaaggagaac
ctgcccccgcacagcccggtcggcatggtgaccgtcatggacgccgaccagggcagcaac
gccgagctcacgctgcgggtccaggaggacggcggcatcttctcgatcgacaacgacacc
ggcaccatctactccaccgtgtccttcaaccgggagcagcagaccagctactccttcaag
gtgaaagcggtggacggcggggagccccccaggtcgtcgaccgccatggtgtcgctctat
gtcatggacgagaacgacaacgcgccgaccgtcaccttcccgaagaacgcctcgtacacc
gtgctcccgccctccagcaacctgcgcacggtggtggccaccgtcctggcgaccgaccga
gacactggcatcaacgctgacctcaactacagcatcgtgggggggaaccccttcaaactt
ttcgagatcgacccggccagcggtgtgatctccctggtgggaaagctcactcagaagcac
tatgggctgcaccggctgatagtgcaggttaatgacagcgggcagccctcacagtacacc
accgcgatggtccatgtgttcgtgaacgagagtgtttcaaacgctacggtagtggaagca
cagatagcccgaagtctccgcacttccttgaagcaagatattgcaggtgatccaaactat
gagatgagcaagcaacgactgagcattgttattggggtggttgctggtgtcatgacagtg
attttaatcatcctggtcgtggtcctggcgaggtactgcagacccaaaaaatccaagaat
ggttatgaggcaggaaaaaaggatccagaagactttttcaccccccagcaacacgacaag
tctaagaaacccaagaaggacaaaaagaacaaaaagtccaaacaacctctgtacagcagc
attgtgactgtggaagcatcaaaaccaaatggacagagatatgacagtgtgaatgagaaa
cttacagagagccctggcatgggtcgctatcgttccatgaatggcggacctgggagccct
gacctcggtaggcattacaaatctagctccccattgccaacggttcaacttcacccccag
tcacctactgcagggaagaaacaccaggcagtgcaagaactaccacctgctaacaccttc
gtagggacaggtgacaacatctcaattgaatcagaccattgctctgaatacagctgtcag
ataaataacaagtacagcaagcagccttttcgtcgtgtgactttttctgtggtgagtcag
cctcaggatccacatcaggggtccctacagagttgttatgatagtggcttggaagaatcg
gaaacaccgagcagcaagagttcatcgggaccaagactaggctcactcccacttccagaa
gacaactatgagaggaccacacctgatggcagcgttggtgaggcagaacacatggaaaat
gattcaaggcctttgcctgatgtagctttgacaggaaaatgtacacgtgaatgtgatgag
tttggccactctgactcctgttggatgccagtgcgcacctcaccagagagaagaaaaaag
aatccgcccaagctttctacattcatgcctgtcgcagatcgaggcagtcaagagaagctc
gccaacggtgcccctcagattataggtgatcgcaatcgaaaccttctcaacaagaggctg
acttcatcatatgagaacttcaatactgctacttatgctaaaaatgaggaagcaaatcct
gaagatatacccctgacacagacagcagatttcaaaccatcttcggtttctcaactcacg
agaagagaagtctacctgtga
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integrated database retrieval system
