Hemiscyllium ocellatum (epaulette shark): 132816034
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Entry
132816034 CDS
T09720
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04145
Phagosome
hoc04814
Motor proteins
hoc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132816034
09142 Cell motility
04814 Motor proteins
132816034
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
132816034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hoc03036
]
132816034
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hoc04812
]
132816034
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
132816034
Cytoskeleton proteins [BR:
hoc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
132816034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Dynein_IC2
WD40_Prp19
WDR55
Beta-prop_EML
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_IP5PC_F
ANAPC4_WD40
CFAP43_N
Motif
Other DBs
NCBI-GeneID:
132816034
NCBI-ProteinID:
XP_060681429
LinkDB
All DBs
Position
5:54622178..54904980
Genome browser
AA seq
629 aa
AA seq
DB search
MSDKSDLKAELERKKQRLAQIREEKKRKEEERKKKEAEMQQKKEPPPEDSDLDRKRRETE
ALLQSIGIAPEPALVPTPMSPSSKSVSTPSEAGSQDSVDGGHGGRALQWDTDPSVLQLQS
DSDLGRRMPKLVISKITQVDFLPREVVSYSKETQTPIAHQPEEDEDDEIPELNLGTESEL
ESQDQKTETKEAAPRELTEEEKQQILHSEEFLIFFDHNIRIIERALAEDSSLFFDYGGKE
LDEKEGDFQAGLNLAFNRQFYDEHWSKHRVVTCLDWSLQYPELMVASYNNNEDAPHEPDG
VALVWNMKFKKNTPEYIFHCQSPVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQ
RTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLTQPQENMELVYNKSKP
VAVTSMAFPTGDVNNFVVGSEEGMIYTACRHGSKAGIGEMFEGHQGPVTGINCHMAVGQI
DFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDL
WNLNNDTEVPTASAAVEGTSALNRVRWASTGREVAVGDSEGHVWVYDVSEQLAIPHGDEW
ARFARTLVEIRANRADAEEESVAELTVQL
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataaaagtgatttgaaagctgaactggagcgtaaaaaacaaagactggctcag
atacgagaagagaaaaaaagaaaagaagaagaaagaaaaaagaaagaggctgaaatgcaa
cagaagaaagagccacctcctgaggactctgaccttgatcgcaagcgaagggagaccgaa
gcattgctacagagcattggcattgccccagagccagcattagtcccaacccctatgtct
ccctcctcgaaatcagtgagtacacccagtgaagctggtagccaggactcagtggatggt
ggacatggtggaagagcattgcaatgggatactgatccttctgtgctccagctgcagtct
gactctgaccttggccgtcgcatgccgaaacttgtgatttcaaaaattacccaagttgat
tttttacctcgagaagtggtgtcgtactccaaagagacccaaacgcccattgctcaccag
ccagaagaagatgaagatgatgagattcctgaattgaatctaggaactgaatctgagctg
gaaagccaagatcagaaaactgaaacgaaagaagctgctcctagagaactcactgaagaa
gagaaacagcaaatacttcattcagaagaatttttgattttctttgaccataacatacga
atcattgaacgtgctcttgctgaagattctagcctcttctttgattatggtggcaaggag
ttggatgaaaaagaaggagacttccaagctgggctaaaccttgctttcaaccgtcagttt
tatgacgagcactggtcgaaacatagagtcgtaacctgtttggattggtcacttcagtat
cctgagttgatggttgcttcctataacaacaatgaagatgctccacatgagccagatgga
gttgctttggtttggaacatgaaatttaaaaagaacacaccagaatatattttccattgt
cagtctcctgtaatgtcggtctgctttgcccgattccatccaaacctagttgttggtggt
acatactctggacagattgttctttgggataaccgcagtcacagacgaactccagttcag
cgtacacctctttctgccgcagctcacacacatcctgtgtactgtgtgaatgttgttgga
acacaaaatgctcacaatctaatcacagtttccacagatggaaagatgtgttcctggagc
ttagatatgttgactcaaccacaggagaatatggagctggtttacaacaagtcaaagcct
gtagctgtcaccagcatggctttcccaacaggagatgtcaacaattttgttgtaggaagt
gaggagggtatgatttatacggcatgtcgacatggcagtaaggctggtattggtgaaatg
ttcgagggtcatcagggtccagtgactggtatcaactgccacatggccgtgggacagatt
gatttttcacatctgtttgtcacctcttcctttgattggacagttaaattgtggacaaca
aagcacaacaagcctctctactcctttgaagacaatgcagactatgtctacgacgtcatg
tggtcaccagtgcatcctgcactatttgcctgtgtggatgggatgggacgattagacctc
tggaacctcaataatgataccgaggtgccaacagctagtgcagctgttgaggggacatct
gcacttaatcgggtcagatgggcatcaactggcagggaggtggcagtaggagattcagaa
ggacacgtatgggtttatgatgttagtgagcaattggcaattcctcatggtgatgagtgg
gcacgttttgctaggaccctggtggagatccgagctaaccgggcagatgctgaagaggag
agtgttgctgaattgactgtacagctgtaa
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