KEGG   Hemiscyllium ocellatum (epaulette shark): 132816037
Entry
132816037         CDS       T09720                                 
Symbol
sem1
Name
(RefSeq) 26S proteasome complex subunit SEM1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
hoc  Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03050  Proteasome
hoc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hoc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    132816037 (sem1)
  09124 Replication and repair
   03440 Homologous recombination
    132816037 (sem1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hoc03019]
    132816037 (sem1)
   04131 Membrane trafficking [BR:hoc04131]
    132816037 (sem1)
   03051 Proteasome [BR:hoc03051]
    132816037 (sem1)
   03400 DNA repair and recombination proteins [BR:hoc03400]
    132816037 (sem1)
Messenger RNA biogenesis [BR:hoc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     132816037 (sem1)
Membrane trafficking [BR:hoc04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    132816037 (sem1)
Proteasome [BR:hoc03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     132816037 (sem1)
DNA repair and recombination proteins [BR:hoc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     132816037 (sem1)
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 132816037
NCBI-ProteinID: XP_060681433
LinkDB
Position
5:complement(55382476..55408044)
AA seq 70 aa
MSEKKAPVDLGLLEEDDEFEEFPAEGWTGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKFGYKMETS
NT seq 213 nt   +upstreamnt  +downstreamnt
atgtcggagaagaaggcgccggtcgacctcggcttgttggaggaggacgatgagttcgag
gagttccccgctgaaggctggactggtttagatgaagatgaagatgcccatgtctgggaa
gataactgggatgatgacaatgtagaggatgatttttctaaccagttaagagctgaatta
gaaaaatttggatacaagatggaaacctcatag

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