Hemiscyllium ocellatum (epaulette shark): 132816348
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Entry
132816348 CDS
T09720
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
132816348
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hoc01009
]
132816348
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hoc04515
]
132816348
Protein phosphatases and associated proteins [BR:
hoc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132816348
Cell adhesion molecules [BR:
hoc04515
]
Cadherins
Protocadherins
132816348
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
132816348
NCBI-ProteinID:
XP_060681784
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All DBs
Position
6:3431788..3438237
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AA seq
903 aa
AA seq
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MELSSRRTGTGCFLHIQEPPLLLLLLLVLPGTVRATELLYRVREESPAGTYIGNLATDLR
LNRSEPGVTYNLASAAGSGRFVDLNRETGELRTSAAVLDREELCPDPGTGSLAEPCWLLL
DVLLLPPRLFRLLKLRLRVEDVNDQAPRFPASSLGLSVPENAEPGSRYPLEPAAEDPEPG
LNGMLRYRLQGAGPAAYSAAYSAAFSLAQEDGAVPGKPAPYLVLEAPLDRESRDRYVMEL
VAEDRGSPSLSGTATVTVSVSDVNDHCPEFPQSELRLSVFSNISVGSTVTRLQARDPDLG
YNARVVYSYGERVPGSSTRLFRLDPASGTIRLASPIREGSARLHRLTVLATGTGCAPVAL
TVSLNIIPVGVTGPPVLSPRYIALQADGVLYLKESEPPRTPLAFFTVTGDREPVRCYLHG
GEAVAAFHLSRYQDLPGEYLLETGQPLDYELQRRYQVTVVAENADGLASRVQLQIQLIDE
NDNAPVFSSPSVQLSVEENNPPNCHLTRLKATDADSGEMGNITYMLSPGVPPVFSVDPLS
GTLSVSTSLDREERDRYRLTIRAIDGGTPSLESTVTVIITVLDVNDNSPRFINKDFNFFV
PEDYPSFSEIGVIGVMDPDAGTNGWVALSILNGSEHFVIDTGKGNLMASVPLDREQQSSY
ILWIQATDGGEPALSAVAKVTVLLIDVNDNPPLVLFPQSNLSFLLVLPSTVPGSSITEVY
AVDKDTGMNAVIAYSIIGHRGPRPETFVIDAGTGNITLHEALVKNDYGLYRLLVKVSDHG
YPEPLHSTVIVNLFVNETLSNESYIENLLRKDPGIRIEESLPETRTDPFQTKLDVFPCET
VLIALSALCFGLFALAFALVCYISFRRKKHRRKAYSVAEVEIPLKKTLASFSLDKKSFND
LDL
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggaactgagcagcaggaggacgggaacaggctgtttcctgcacatccaggagccgccg
ctgttgctgctgctgttgctggtcttaccgggcacggtccgggccaccgagctgctgtac
cgggtccgggaggagtcaccggcgggcacctacatcggtaacctggccaccgacctgagg
ctgaaccggagcgagccgggagtcacctataacctggcgtcggcggcgggctccggccgc
ttcgtggacctgaaccgggagaccggggagctgcggacctcggcggcggtgctggaccgg
gaggagctgtgcccggatcccggtaccgggagcctggcggaaccgtgctggctgctgctc
gatgtcctgctgctgcccccccgcctgttccgcctcctcaagctccggctccgggtcgag
gacgttaacgaccaggcgccgcggttccccgcctccagcctcggcctctcggtaccggag
aacgcggagccgggctcccgctaccctctggaaccggcggccgaggacccggagcccggc
ctcaatgggatgctccgctaccggctgcagggggcgggccccgccgcctactccgccgcc
tactccgccgccttctccctggcgcaggaggacggcgcggtgccggggaaaccggctcct
tacctggtactggaggcgccgctggaccgggagtcccgggatcggtatgtgatggagctg
gtggcggaggaccggggcagcccgagcctgtcggggacggcgacggtaacggtgtcggtg
agcgacgtgaacgaccactgccccgagttcccgcagagcgagctccgcctgagcgtgttc
tccaacatctcggtgggcagcaccgtcacccggctgcaggctcgggaccccgacctgggg
tacaacgcccgggtcgtctactcttacggggagcgggtccccgggagctccacccgcctg
ttccgcctggatcctgcctctggtaccatccgcctggcctcccccatccgggagggcagt
gcccgcttacaccggctcaccgtgctggctaccggcaccggctgtgccccggtcgccctc
accgtcagcctgaacattatcccggtgggggttaccggacccccggtgctcagcccccgg
tacatcgccctccaggcggacggcgtgctttacctgaaggagagtgagcccccccggacc
cccctggccttcttcaccgttaccggggaccgggagccagtccgctgctacctgcacgga
ggggaggcggtggcggctttccacctgtcccggtaccaggacctccccggtgagtacctc
ctggagaccgggcagcccctggactatgagctccagcggcgttaccaggtcacagtggtg
gcagagaatgcggacgggttagccagcagggtccaactccaaattcaactcattgacgag
aacgacaacgcgccggtgttcagcagcccctcagtacagctctcggtggaggagaacaac
cccccgaactgccatctcaccagactgaaagccacagacgctgacagcggagagatgggt
aacatcacctacatgctcagccctggggtacctccagtcttcagtgtggacccactcagc
gggaccctctctgtatccaccagtttagaccgagaggaacgagacaggtacagactcacc
atcagagctatcgatggcgggacaccgtccctggaatctaccgtcaccgtgatcatcacc
gtcctggatgtcaatgacaacagccccaggttcatcaacaaagacttcaacttctttgtc
cctgaagactacccgagttttagtgagattggtgtgattggggttatggatcctgatgct
gggaccaatggctgggtcgccttgtctatccttaatggcagtgagcactttgtgatagac
acaggcaagggaaacctcatggcaagtgtccctttggacagggaacagcagagctcctat
attctttggattcaagctacagatggaggagaacctgctctttctgctgttgcgaaagtg
acagtgcttctgatagatgtcaatgataacccaccgttagtcttgttccctcagtctaac
ctctctttccttctcgtcctcccatccacggttcctggctcttccattactgaagtgtat
gctgttgataaagacacaggaatgaatgctgtcattgcttacagcatcattggtcacaga
ggaccccgtccagagacttttgtcattgatgcaggcaccggtaacatcacattgcatgaa
gctttggtgaagaacgattatgggttgtacagactgctggtcaaagtcagtgatcatgga
tatccagagccacttcacagcacagttatagttaaccttttcgtcaatgaaacattgagc
aacgagagctacatagaaaatctactgaggaaagatcctggcatcaggatagaggagagt
ctaccagagacaagaactgacccttttcaaaccaaactagatgtgtttccatgcgagact
gtcttgatagcactgtcagctttatgcttcggactctttgccttagcttttgcattagtc
tgctacatttcatttcgaagaaagaaacacagaagaaaagcctacagtgtggcagaggtt
gagatcccactaaagaagacattggcttcattttcattggataaaaagtcattcaatgat
ttagatctatga
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