Hemiscyllium ocellatum (epaulette shark): 132816350
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Entry
132816350 CDS
T09720
Name
(RefSeq) protocadherin-17-like isoform X1
KO
K16499
protocadherin delta 2
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hoc04515
]
132816350
Cell adhesion molecules [BR:
hoc04515
]
Cadherins
Protocadherins
132816350
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
132816350
NCBI-ProteinID:
XP_060681786
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All DBs
Position
6:complement(4779556..4905655)
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AA seq
1136 aa
AA seq
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MYLHTVIFALLWTGALTLKNLKYTILEEQGPGTVIGNIAKDARLASSSPEQRKANFRVLE
NSAPHLLDVDRESGLLYTKQRIDREAVCKRAPKCLVSLEVFANDKVLCMIKVEIVDINDN
APSFASERIEVEIPENAAPGTRIPLASARDPDAGPFGLQGYELSGPGSGPFGLEVKSRGD
GTKFPELVIQRPLDREQQPRHVLQLTALDGGEPPKSGTVQVRLEVVDTNDNSPAFEEPSL
TVEVSEDTPAGTVLARVNASDPDEGSNGEVLYSFSPYVSARVRELFSIEPRTGALRLRSP
LDYEESSIYEIDVQARDLGPNSIPAHCKVSVRLLDVNDNAPAVSFVSVHQGPVSEAAPPG
TVIALVKVTDRDFGRNGQLQCRVLGANSAPFRLEENYDNFYTVLTERPLDRELAELYNLT
IVARDNGSPPLNASRSFTVRVADENDNAPRFTKPVYVLQVPENNIPGEYLGSVLAHDPDL
GQNGTVSYSIVPSRVGDVSVYTYVSVNPSNGAIYALRSFNYERTKSFEFKVQAKDSGSPP
LESNATVRVTVLDVNDNAPVIVLPVLQNDTAEIHVPRNAGLGYVVATVRAVDSDYGESGR
LSYEIAEGNERHLFDMDPSSGEIRTAQAAWDEQAASAELVVRVSDHGKPSLSAVARLVIV
AYLGAAPDDEHRLRRQQRPWDMSLPLIVTLSSISVILLASMVTIAVKCRRENKEIRTYNC
RIAEYSHPHLGGKGSKKKKISKNDIMLVQSEVEERDAMNVVSSPSLASSPVYFDYQTRLP
LSSPRSEVMYLKPTSNNLTVPQGHGLCHTFSGQGSNPSDGTSTRMSLIQTDNFPTEPNYM
GSRQQFVQSSSTFKDPERVSLRDSGHGDSDQADSDQDTNKGSCCDMSAKDALKIKSTTTK
PPVPEQEKEDCVNCTDECRVLGHSDKCWMPQFPVSNQAECSDYRRNLFVPAVETTVESET
PESTAPAGKKTFCTFGKDKREHTILVANVKPYLKAKRALSPLLQEVSSAASSPDKTSVAG
SNSSSKRPMGAFEVKQKVADTSTDSTAQYLPSDTHYPSPDKQRDSHFITPEAVATVFADV
HSRAGREFNEVDTVLDQYEPTSRDLAREGVDAEQVVREIDKLLQDCRGSDPSTVRK
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgcacactgtaatttttgccttattgtggactggagcgctgaccttgaagaat
ctgaaatacacgatcctggaggagcagggacccgggacggtgatcgggaacatcgccaag
gatgcgcggctggcgagcagcagccccgagcagcggaaggcgaactttcgggtgctggag
aactcggcgccgcacctgctggacgtggaccgggagagcggcttgctgtacaccaagcag
cggatcgaccgggaggcggtgtgcaagcgggcgcccaagtgcctggtctcgctggaggtg
ttcgccaacgacaaggtgctctgcatgatcaaggtggagatcgtggacatcaacgacaac
gcgccgagcttcgcgagcgagcgcatcgaggtggagatcccggagaacgcggcgccgggc
acgcgcatcccgctggccagcgcgcgcgacccggacgcgggccccttcggcctgcagggc
tacgagctgagcgggccgggcagcgggcccttcggcctggaggtcaagtcccgcggcgac
ggcaccaagttccccgagctggtgatccagcggccgctcgaccgcgagcagcagccgcgc
cacgtgctgcagctgacggcgctggacggcggcgagccgcccaagtcgggcacggtgcag
gtccgcctcgaggtggtggacaccaacgacaacagcccggcgttcgaggagccgagcctg
acggtggaggtgagcgaggacacgccggcgggaaccgtgctggcgcgggtcaacgccagt
gacccggatgagggcagcaacggcgaggtgctctactccttcagcccgtacgtgagcgcg
cgcgtgcgcgagctcttctccatcgagccgcgcaccggcgcgctccggctgcgctcgccg
ctcgactacgaggagagcagcatctacgagatcgacgtgcaggcccgcgacctgggcccg
aactccatcccggcccactgcaaggtctccgtccgcctgctcgacgtcaacgacaacgcg
cccgccgtcagcttcgtgtcggtccaccagggcccggtgagcgaggccgcgccgccgggc
accgtcatcgccctggtcaaggtgaccgaccgcgacttcggccgcaacggccagctgcag
tgccgcgtgctgggcgccaactcggcgccgttccgcctggaggagaactacgacaacttc
tacacggtgctgaccgagcggccgctcgaccgcgagctggccgagctctacaacctgacc
atcgtggcgcgcgacaacggcagcccgccgctcaacgccagccgctccttcaccgtgcgg
gtggcggacgagaacgacaacgcgccgcgcttcaccaagccggtgtacgtgctgcaggtg
cccgagaacaacatcccgggcgagtacctgggctcggtgctggcccacgacccggacctg
ggccagaacggcaccgtctcctactccatcgtgccgtcgcgggtcggcgacgtctccgtc
tacacctacgtgtccgttaacccgtccaacggcgccatctacgcgctccgctccttcaac
tacgagcgcaccaagtcgttcgagttcaaggtgcaggccaaggactcgggctcgccgccg
ctcgagagtaacgccacggtcagggtcaccgtgctggacgtcaacgacaacgcgccggtc
atcgtgctgcccgtgctgcagaacgacaccgccgagatccacgtgccccgcaacgccggc
ctcggctacgtcgtcgcgaccgttcgggccgtcgacagcgactacggcgagagcggccgc
ctctcctacgagatcgccgagggcaacgagcggcacctgttcgacatggaccccagcagc
ggcgagatccgcaccgcccaggccgcctgggacgagcaggccgccagcgccgagctggtc
gtgcgggtcagcgaccacggcaagccgtccctgtcggcggtcgcccgcctggtgatcgtc
gcctacctgggcgcggcgcccgacgacgagcaccggctgcggcggcagcagcggccctgg
gacatgtcgctgccgctgatcgtcaccctgagctccatctcggtcatcctgctggcctcg
atggtcaccatcgcggtcaagtgccgcagggagaacaaggagatccgcacctacaactgc
cgcatcgccgagtactcgcaccctcacctggggggcaagggcagcaagaagaagaagatc
agcaagaacgacatcatgttggtgcagagcgaagtcgaggagagggatgccatgaacgtg
gtgagcagcccctcgctggcctcttctcccgtttatttcgattaccagacccgcctgcct
ctcagctccccccgctcggaagtcatgtacctgaagcccacctccaacaacctgaccgtc
ccccagggccatgggctctgtcacactttctccggacagggttccaacccgagcgacggg
acctcgacgagaatgtcactgattcagacagacaattttcccacagagcccaattacatg
ggcagcaggcagcagtttgttcaaagtagttccacgttcaaagatccagagagggttagt
ttgagggacagcggacatggagacagtgaccaagccgacagcgatcaggatactaataaa
ggttcctgctgtgacatgtctgccaaggacgcactcaagataaaatctacaacaaccaaa
cccccagtccctgaacaagagaaggaggactgcgtcaactgtacagatgaatgtcgtgtc
ttgggtcattccgataaatgttggatgcctcagttccctgtctccaaccaagctgaatgt
tcagattatcgccggaatctgtttgtgccagcagtggagaccacagttgaatctgaaact
ccagaaagcacagctcctgctgggaaaaaaactttctgtacttttgggaaggacaaacga
gagcacaccattcttgttgcaaacgttaaaccttatttaaaagctaagcgcgctctaagt
cctctcttgcaagaggtctcatcggctgcaagcagtccagacaagacttcagttgcaggc
agtaacagctcaagtaaacgacctatgggtgcatttgaagtgaagcagaaagtggccgac
acatcaacagattcaaccgcccaatatttaccatctgatacccactacccatcacctgac
aaacagcgcgatagccacttcattacacccgaagcggtggcaactgtctttgcagatgtg
cactccagagccggccgggagttcaatgaagtggacactgtcttggaccagtatgaaccc
acaagccgggacctcgctcgagaaggcgtagacgccgaacaagtggttcgagaaattgac
aagcttttacaagattgtcgagggagtgacccttcaactgtgagaaagtga
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