Hemiscyllium ocellatum (epaulette shark): 132816393
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Entry
132816393 CDS
T09720
Symbol
tbc1d4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hoc04131
]
132816393 (tbc1d4)
Membrane trafficking [BR:
hoc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
132816393 (tbc1d4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
132816393 (tbc1d4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
132816393 (tbc1d4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
DUF4249
Motif
Other DBs
NCBI-GeneID:
132816393
NCBI-ProteinID:
XP_060681877
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All DBs
Position
6:complement(29389210..29664628)
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AA seq
1288 aa
AA seq
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MEEDSGNCQGQPEEKGKPEKQFTLWYMGCSTLDRRTTLPMLPWLMAEIRRRCEKQELGSS
LAAREVQLSLVPPLIRCVPKATSSNPSVFIFEHKAQHVTRFIHNSHDLTYFAYLIRTQPD
NPESEMACHVFRATDPNQVPDVISSIRQVSKATLKGDTKSRQDSEDAFYNSQKYEVLYCG
KVVVTHKKAPSTLIDDCIEKFTQHQLEKERLRLLNEKPLVDVTADQEEDDASGDLALPHD
VADEATVSTNLPSASNSQSDLLGLGLRSALTEPSLEDEALEEEHAEFRSRCNSVASIRLK
RVPDLGTKLPTRRRHASAPSHVQPSDTEKNRTMLFQVGRFEINLISPDTKTVVLEKNFKN
ISSCSQGIKHVDHFGFICRESVEQGLNQYVCYVFQCANESLVDEVMLTLKQAFSTAAALQ
NAKTQIKLCEACPMHYLHKLCERIEGLYPPRAKLAIQRHVSLLSDNEQADIFERVQKMKP
ADDQDENELVILILRQICENKQKTHAHLGESPMPVPNNMIPEHSASTGRFKLDVLKNKAK
KSLTSSLENIFSRGAKMRGRLGSMDSFERCNSLASDASRDASPGESPPNSPPVSPRASPI
SSLGQLFAEDDPDSPQFRRRAHTFSHPPSSSKRRISFPNEKLPHGRSPIFRQQSEIIRSS
PINIVRSNRSNSESESTSSSLPSSLSVPTFLKPFYTNTSRLLQQSESGTSKSDGEGRRRA
FSGCSTESLSGGGGILTPRRISWRQRIFLRVASPMNKSSAAMQQKGTLEDHLESIELPPL
SPLTPAVEEDPLASLLMADDAPVGEKKKHSSEELRIMWRKAICQQILLLRMEKENQRLEA
SRDELQTRKVKLDYEEFVLCQKEVSTVWDKMLTTPGRAKVKVDMEKVHAALSQGVPKARR
GEIWQFLAEQYRLRHRLPEKQQPADISYKELLKQLTTQQHAILVDLGRTFPTHAYFSAQL
GAGQLSLFNLLKAYSLLDKEVGYCQGISFVAGVLLLHTSEEQAFEMLKFLMYDLGFRKQY
RPDMMSLQIQMYQLSRLLHDYHRDLYNHLEDNEVSPSLYAAPWFLTFFASQFPLGFVARV
FDIMFLQGTEVIFKVALSLMSSHEALILQCDSFETIVDFIKSTIPNLSHTQMEKTIVQVF
EMDISKQLHAYEVEYHVLQDEMVENSLPNDDGDRLEKLERANCQLKRQNMELLEKLQATR
FKIQNLEASIESILIRENKMKLLIRTMEQEKQSHLKTIEHMRKYLPQDVLNDGEFLARKN
SGIFSSRRPEAMDEELDGSKVKIGNNKP
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacagcggcaactgccaaggccagcccgaggaaaagggcaaacccgagaag
cagttcaccctgtggtacatgggctgctccaccttggaccgcaggaccacgctgcccatg
ttgccctggctcatggctgagatccgcaggcgctgtgagaaacaagagctagggtcatcc
ctggctgcacgcgaagttcagctcagcctggtaccacctctcatcaggtgtgtgcccaaa
gccaccagcagcaatccctccgtcttcatctttgagcataaggcacagcatgtcactagg
ttcatccacaacagccacgacctcacctacttcgcctatctgatcaggacccaacctgac
aacccagagtcggagatggcttgccatgttttcagagccactgacccaaaccaggttcct
gatgttatcagtagtattcggcaagtatcgaaggcaactctaaagggggacacaaaatcc
cggcaggacagtgaagatgctttttacaactcgcagaagtatgaggtgctgtactgcggt
aaagtggtggtgacacacaagaaggctccatccactcttatcgacgactgcatcgagaag
ttcactcagcaccagctggaaaaggagaggctgcggctgctcaatgagaagcccctggtt
gacgtcaccgccgaccaggaggaagatgatgccagtggggacctagcacttccccacgat
gtggctgacgaggcgacagtcagcaccaacctgccttcagccagcaacagtcagagcgac
ctgctgggcttgggcttacgttcagctctgactgaacccagcctggaggacgaagctctg
gaagaggagcacgccgagttccgctctcggtgtaacagtgtcgccagcatccggctcaag
agggtgcccgatctgggtaccaaattgccaacccgaaggcgccatgccagcgctccaagt
cacgtccaaccttctgacacagagaagaataggacaatgttattccaggtcggtcggttt
gaaattaacctcatcagtcctgataccaaaacagttgtacttgaaaagaatttcaaaaat
atttcctcatgttctcagggtattaaacacgtggaccattttgggttcatttgtcgagaa
agtgttgaacagggtctgaatcaatacgtgtgctacgtgtttcagtgtgccaatgaatca
ctggtggatgaggtcatgctgaccttgaagcaggccttcagtactgctgctgccctccag
aacgctaagactcagatcaaactgtgtgaggcatgccccatgcattacctgcataaactc
tgtgaacggattgaaggtctttacccaccaagagccaagcttgcgatacagaggcatgtt
tctcttttgagtgacaatgaacaagctgatatttttgaacgtgttcagaaaatgaagcca
gctgatgaccaagatgagaatgaactggtgatcctcattctgcgacagatatgtgagaat
aaacagaagacccatgctcatcttggagagagccccatgcctgtgccaaataatatgatt
ccagagcattctgcaagcacagggagatttaaacttgatgtcctgaaaaacaaggccaag
aagtctctaaccagctctctggaaaatatcttctcacggggtgccaagatgcggggtcgc
ttaggaagtatggacagctttgagcgttgcaacagccttgcatcggacgcttccagggac
gcttctccaggggaatcccctcccaactctccacccgtcagcccccgggcgtcccccatc
tcctcgctgggccagctgttcgcggaggacgatcccgactcgccgcagttccggagaagg
gctcacactttcagccacccgccgtcgagcagcaagcggagaatcagctttccaaatgag
aagctgccccacggccggtctcccatctttcgccagcagtcggagattattcggagcagc
cccatcaatatcgtgagaagcaatcgcagtaactcagagagcgaatccacttccagcagc
cttccctcatccctgtccgtcccgactttcctgaagcccttttacaccaacaccagcagg
ctgctgcagcagtcggagagtgggacatccaagagtgatggtgaaggcaggagaagggcc
ttttctggctgcagcactgagtcgttgagtggaggagggggtatcctcactcctcggcga
atctcttggcgccagcggatctttctacgcgtcgcctcacccatgaacaagtcctctgcg
gccatgcagcagaaaggaactttggaagatcatcttgaaagcattgagctgccaccgctt
tcaccgctcactccagctgtggaagaggatcccttagcctccctgctgatggcggatgat
gcccccgttggagagaagaagaaacactcttctgaggagctgcggatcatgtggagaaag
gccatctgtcagcagatcctattgcttcggatggagaaggaaaaccaaaggctggaagcg
agcagagatgagcttcagaccaggaaggtaaaactggattatgaagagtttgtgctttgt
caaaaagaggtttctacagtttgggataaaatgctaaccactccaggaagggcaaaggtg
aaagttgacatggagaaagtccatgctgctcttagtcaaggtgtaccaaaggctcggaga
ggagagatctggcaattcttagccgagcagtaccgcttgagacaccggttaccagagaaa
cagcaaccggcagacatttcatacaaagaacttttgaaacagctgactacgcagcaacac
gccatcctggttgaccttggacgaacatttcctacccatgcatatttctcggcacagtta
ggagctggacagctctcactgtttaatctccttaaggcctactcattgctggacaaggaa
gtgggctactgccagggcattagctttgtcgctggggtcctccttctgcacacgagtgag
gagcaagcctttgaaatgctcaagttcctcatgtatgatctaggtttccggaagcagtat
aggcctgacatgatgtctttgcagattcagatgtaccagctgtcaagacttctacatgac
tatcaccgggatttgtacaaccaccttgaagacaatgaggtcagccccagcctctacgca
gccccgtggttcctcacctttttcgcctcccagttcccactgggatttgtcgccagagtc
tttgatattatgtttctccaagggactgaggtgatatttaaagtggcccttagcctgatg
agcagtcacgaggcattaattctgcaatgtgacagttttgagaccatcgtagatttcata
aagtcaacaattccaaatctgagtcacacacagatggagaaaactattgttcaggtgttt
gagatggacatttccaagcagctccatgcctatgaggtagagtaccatgtgttgcaagat
gagatggtggagaattcattgcccaacgatgatggagaccgtctggagaaactggagaga
gcaaattgtcagcttaagagacaaaacatggaactactggagaagcttcaggccactcgc
ttcaagatacagaacctggaagccagcattgaaagcattttaatccgagaaaataaaatg
aagctcctaatccgtacaatggaacaggagaagcagtcacacttaaagactatagaacat
atgcgcaaatatttgccacaggatgtcctaaatgatggggaatttctggcaaggaagaat
tcagggattttctcatcaagaaggcctgaagcaatggatgaggaattggatggtagcaaa
gtgaaaataggaaataataagccatga
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