Hemiscyllium ocellatum (epaulette shark): 132816444
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Entry
132816444 CDS
T09720
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR isoform X1
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
132816444 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
hoc04050
]
132816444 (edar)
Cytokine receptors [BR:
hoc04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
132816444 (edar)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
DUF3671
Chordopox_G3
MLANA
PFF1_TM
TNFR_c6
DUF2852
HpsJ
CemA
Orf78
Motif
Other DBs
NCBI-GeneID:
132816444
NCBI-ProteinID:
XP_060682018
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All DBs
Position
6:complement(73987165..74078497)
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AA seq
469 aa
AA seq
DB search
MIFDFSQTKHQKANKKMLHCKTLWRAYIFPLLLVSLISLVIADYSSECGENEYFNQTTGS
CHACPQCHSGEEPVSNCGYGVKDDSYGCQPCQNGKFSKGVYQICRRHKDCEGFFRATVLT
PGTVETDAECGPCIPGYYILDNRSRNTYTKVCHSCLLAPPNTKECLGITLSSSFSSSSSA
VTGNSAVLQETHKDHAGQGHLGTALIIAMSTIFIMAIAIVLIVLFYILKTKSSTQACCSS
NSVKNIEAQINTQEDKKEVQENVVIFSEKDEFDNKLNAVPPKTEKNENDASSENEQLLSR
SMDSDEEAALDKRGMSDLCLLSLVPLTRDKSANNKASGIQTRREKILELCKKVCSYTEGL
SPTELPFDCLEKTSRMLSSTYSTDKAIVKTWRHLAESFGLKRDEIGGMTDGMQLFDRIST
AGYSIPELLTRLVHIERMDAVEALCMDVLECTQCAPIANPVILPKCANV
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgatttttgatttctcacaaacaaaacaccaaaaggcaaataaaaagatgttgcactgc
aagacgctatggcgggcatacattttccctttactattggtatccctgatctctttagtt
attgctgactactcctcagaatgtggggagaatgaatactttaaccaaacaactgggtct
tgccatgcctgtcctcagtgtcactcaggtgaagaacctgtttcgaactgtggatatgga
gttaaggatgattcctatggctgccaaccttgccagaatggcaaattctcaaagggtgta
tatcagatctgcagaagacacaaagattgtgagggattctttcgggctactgtcttgaca
ccaggcactgtagagaccgatgcagaatgtgggccttgtatcccaggttactacatccta
gacaatagatccagaaacacctacacaaaggtttgccattcctgtttactggcacctcca
aacacaaaagaatgtttgggcattactttgtcttcaagcttttcgagcagtagctcagct
gtcactggaaattctgcagttctacaggaaactcacaaagatcatgctgggcaaggacac
cttggcactgctttgataattgccatgtccaccatattcataatggccatagccattgtt
ttaattgttcttttctacattttaaagacaaagtcttctactcaagcttgttgcagcagc
aattctgtaaaaaatattgaagctcagatcaatacccaagaagacaagaaggaagtacaa
gaaaatgttgtaatattctccgagaaagatgaatttgataacaaactcaatgcagttcca
cctaagactgaaaaaaatgaaaatgatgcttcgtcagaaaatgagcagcttttgagtcga
agtatggacagtgatgaggaagctgcattagacaagcggggaatgtccgatttatgcctc
ttatcattggttcctttaacaagagataaatcagcaaacaacaaagcaagtgggatacag
acgcggagggagaagatacttgagctatgcaagaaagtgtgcagttacacagaagggctc
agcccgacagaactaccttttgactgtcttgagaaaaccagcagaatgctgagctctacc
tacagcacggataaagctattgtgaaaacatggcgtcatctggcagagagctttgggctg
aagagggatgaaataggtggaatgacagatggaatgcaactctttgatcgtataagtaca
gcaggttatagcatccctgaactgcttaccagacttgtgcatatcgaaaggatggatgct
gtagaagccttgtgtatggatgttctagagtgcacgcaatgtgcaccaatagctaatcct
gttatcttacccaaatgtgcaaatgtgtag
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