Hemiscyllium ocellatum (epaulette shark): 132816532
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Entry
132816532 CDS
T09720
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04810
Regulation of actin cytoskeleton
hoc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
132816532 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
132816532 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132816532 (cyfip1)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
132816532 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
132816532 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Motif
Other DBs
NCBI-GeneID:
132816532
NCBI-ProteinID:
XP_060682234
LinkDB
All DBs
Position
6:complement(108487657..108684570)
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AA seq
1253 aa
AA seq
DB search
MTAQVTLEDALSNVDLLEDLPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRNAIDRFCNEVKRLCHTERRRDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSDPQSIQESQNLSMFLANHNKITQSLQQQLEGIPGYEELLAD
IVNICVDYYENRMYLTPGEKHMLLKVMGFGLYLMDGTVSNIYKLDAKKRINLNKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWASTSSSSSPQYNIVEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQESQKTDAEYQKLSELSLQGMQLLSQWSAHVMEVYSWKLVHPT
DKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTI
YAALQNFAQKTLREPLRQAIKKKKNVIQSVLQAIRKTICDWDVGHEPTNDPALRGEKDPR
GGFEIKVTPRAVGPSSTQLYMVRTMLESLIADKSGAKKTLRSSLEGPTILAIEEFHRHSF
FYTHLLNFSETLQHCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKILAGS
LLLDKRLRAECKNQGANIPTPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSL
ELAITRFESEDITSIVELEGLLEVNRMSHKLLSKYLTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTQRFVRTVLPFSQEFQRDKQPNAQPQYLYGTKALNLAYSS
IYSNYKNFVGPPHFRAICKLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLIEQSLSLEEVC
DLLHAAPFQNILPRIHVKEGERLDTKMKRLEAKYAALHLVPLIERLGTPQQVAIAREGDL
LTKERLCCGLSMFEVILTRIRQFLDDPIWRGPLPTNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLHWAGCMIITLLGQQRRFDVLDFCYHLLKVQKHDGKDDVLKNVP
LKKMVDRIRKFQILNDEIFAILNKYLKSGDSENVPVEHVRCFQPPIHQSLASS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgactgcacaagtgactttggaggatgccttatccaacgttgaccttctggaagactta
ccattgcctgatcaacagccttgtattgaaccaccaccttcatcacttttgtaccaacca
aatttcaacaccaactttgaagatagaaatgcatttgttacgggaattgcaagatacatt
gagcaagcaacagttcattccagcatgaatgaaatgctagaggaggggcaggaatatgct
gttatgctgtatacttggagaagttgttcaagagctattcctcaggttaaatgcaatgaa
cagccaaatagagtagaaatttatgaaaagacagtggaagttcttgagccagaggtcact
aagcttatgaatttcatgtatttccagcgcaatgcaattgatcggttttgtaatgaagtg
aagcgactctgtcatacagagaggaggcgagattttgtttcagaagcttatcttctgaca
ctgggcaaattcattaacatgttcgcagtattggatgaattaaagaacatgaaatgcagt
gtgaaaaatgaccactctgcgtacaaacgagctgctcaatttcttcggaaaatgtcagac
ccacaatccatacaagaatctcaaaatctctctatgtttcttgcaaaccataacaaaatt
actcagtcgctgcagcagcaacttgaaggcattccaggctatgaagagcttcttgctgac
attgtaaatatttgcgttgattattatgagaatagaatgtaccttactcctggcgagaaa
cacatgctgctcaaggtgatgggctttggactttaccttatggatggaactgtaagcaat
atatacaagcttgatgccaagaagcgaataaacttgaacaagattgacaaattttttaag
caattgcaggtggtgcctttatttggtgacatgcagatcgagttggccaggtacatcaaa
acaagtgctcattatgaggaaaacaaatcaagatgggcctccacatcttccagtagtagc
cctcaatacaacattgtggaacaaatgattcagatccgggaagatcacatgcgtttcatc
tctgaactggctcgctatagcaacagtgaggtagtaacagggtcaggtcgacaagaatct
cagaaaactgatgctgaataccagaagctgtctgaactttctttacagggcatgcaacta
ttgtcccaatggagtgctcacgttatggaagtgtactcttggaaacttgtgcatcccact
gataagtactctaataaagactgcccagataatgcagaagagtacgagagagcaactaga
tataattacacaagtgaagagaagtttgcacttgttgaggttattgccatgataaaagga
ttgcaggtgctgatgggcagaatggagagtgtgtttaatcatgcaattcgacataccatt
tatgctgcgctccaaaactttgctcagaaaacacttcgtgagcctttgcgtcaggctatc
aagaagaagaagaatgtgattcagagtgttctgcaagcaattagaaagactatttgtgat
tgggacgtcggacatgagccaacaaatgatcctgcactccgaggagagaaagatccgaga
ggaggctttgagatcaaagttactccccgggcagtcggaccatctagtacccagctctac
atggttagaactatgctagagtccctcattgctgacaaaagtggcgcaaagaaaaccttg
agaagtagtcttgagggccccaccattttggcgatagaagaatttcaccggcattcattc
ttctacacgcatttgctcaatttcagtgaaactcttcagcattgctgtgatctgtctcag
ctttggttcagagaattcttccttgaactgacaatgggcagaagaatccagtttccgatt
gagatgtctatgccatggattttgactgatcatattttggagaccaaagaagcctcaatg
atggagtatgtattatattccttggacctttacaatgacagtgcccattatgcactgact
aaattcaagaagcagttcctttatgatgagattgaagcagaggtaaacctctgctttgac
caatttgtatataaattggctgatcaaatatttgcttactacaagattctggcaggaagc
ctccttctggacaaacggctgcgagcagagtgtaagaatcagggagctaatatacctaca
cctccatcaaatagatatgagactttattgaaacaaagacatgtacagcttcttggtagg
tcaatagacctgaatcggctgatcactcaaagaatttcagcagcaatgtacaaatcgtta
gaattggcaattacacgatttgagagtgaagacatcacttctattgtggaacttgaaggt
ctgttagaagtcaaccgtatgagtcacaagctgctaagtaaatacttaaccctggacagt
tttgatgccatgttcagggaagccaatcacaatgtatctgcaccatatggaagaataact
ctccatgttttctgggagttgaattatgatttccttccaaactactgctacaatggttcc
acacaaaggtttgtgcgtactgtgctgcccttctctcaagagtttcaaagagataaacaa
cctaatgcacagcctcagtatttatatggaactaaggctctgaacttggcatacagcagc
atttacagcaactacaaaaattttgtgggccctccacattttagagcgatttgtaagctt
ctgggctatcaaggaattgctgtggtaatggaggaactgctcaaagttgttaaaagccta
ctacaaggaaccattttgcaatatgtgaagactttaatggaagtgatgcctaaaatctgc
cgtttacccagacatgagtatggttcaccaggaattctggaattcttccatcatcagctg
aaagacattgtggaatatgcggaactgaagactgtgtgttttcaaaatttacgagaagtt
ggcaatgctgttcttttctgtcttcttattgagcagagtctgtctctggaggaagtctgt
gacttgctacatgctgcaccattccagaatattttgccaagaatccatgtcaaagagggt
gagcggctagacacaaagatgaagagactggaggctaaatatgctgcacttcatcttgtt
ccactgatagaacgacttggaacacctcagcaagttgcaattgcaagagaaggggatctg
ctgacaaaggaacggctctgttgtggtctctccatgtttgaagtgattctgacacgaatc
cggcagtttctggatgatcccatatggcgtggacctcttccgactaatggagtaatgcat
gtggatgaatgtgtggaatttcacaggctgtggagcgccatgcagtttgtgtactgtatt
ccagtgggagcacatgagttcactgtagagcaatgctttggagatggactgcactgggct
ggctgtatgatcattacactgcttgggcagcaacgccgatttgatgtccttgacttttgt
tatcatttgctcaaagttcagaagcatgatgggaaagatgatgtcctcaaaaatgtgcct
ttgaagaaaatggttgacagaattcgcaaattccaaattctcaatgatgagatctttgct
atcttgaataagtatctgaagtcaggtgatagtgagaacgtacctgtggagcacgtccgc
tgtttccagccacctattcatcagtcgttggcaagctcatga
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