Hemiscyllium ocellatum (epaulette shark): 132816570
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Entry
132816570 CDS
T09720
Name
(RefSeq) autophagy-related protein 16-1-like isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04136
Autophagy - other
hoc04140
Autophagy - animal
hoc04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132816570
04136 Autophagy - other
132816570
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
132816570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hoc04131
]
132816570
03029 Mitochondrial biogenesis [BR:
hoc03029
]
132816570
Membrane trafficking [BR:
hoc04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
132816570
Others
Specific organelles associated proteins
Auto phagosome
132816570
Mitochondrial biogenesis [BR:
hoc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
132816570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ATG16
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_SCAP
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_SPT8
RMC1_N
Beta-prop_ELP1_1st
eIF2A
Beta-prop_HPS5
WbqC
DUF6998
DUF4706
GAS
Motif
Other DBs
NCBI-GeneID:
132816570
NCBI-ProteinID:
XP_060682322
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All DBs
Position
6:complement(121272255..121369902)
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AA seq
589 aa
AA seq
DB search
METPSSGRDWRKHIVRQLQHRDRRQKLHFEDLIHSYNQLLMKSNIVQLWRDQHLAATPSL
SPEPQNVVSLQSRHRKELIEMYQANGELAQEVFSLSKQHQHREVELQVSHSRLVELEVKL
SELEGERERLLQRFEELEKANARVKEDYDNLQQLYRSQWEQLLKREVEGTELIQSMIDIK
VQAARDLNYRNEKPKRVQAKNLEKDLAVVSRVPISMDTDVFQPVQKVPPETAKHQEIKIF
KPFRSSRSSSLSLPPHPRLFQSFKELFRKRANTSFIGVDCSPTNFCSVARIPARVRFSLQ
EAHDGEVNAVKFSPNSKILATGGSDRKVKLWDIVGGMLQLVKILEGSNDGVTSIEFDPSG
LHLLAGSYDNTARLWSLKDCELKHTLSGHSAKVTAAKFKFYCREAVTGSHDRTIKVWDLS
KAACVSSIPLPSRCSDIVCSDYLIISGHFDEKVRLWDTRSGTKTDEIPLQGKVTSLDINA
ERTQLLSCSRDDLLKVVDLRMNETRQELRAEGFKCGADWTKAIFSPDGSYAVVGSSDGVL
YIWDTLAGKLETSLVGQHKSSINAVSWSLSGEYVVSVDRSRLASLWTDC
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggagactcccagctccgggagggactggaggaaacacatcgtccggcagctccaacac
cgagatcgacgccagaaactacacttcgaggatctcatccactcctacaaccagctcctg
atgaagtccaacattgttcaactctggagagaccagcacttagcggcaactcccagccta
tctcccgaaccccagaatgtggtaagcttacagagcagacatcgaaaggaactgatcgaa
atgtatcaggcaaatggagagctcgcacaggaggtcttcagtctgagcaaacagcaccaa
cacagagaagtggaactccaggtcagtcacagcaggttggtggagttggaggtgaagctg
tctgagctggagggagagcgggagcgattactgcagcgattcgaggaattggagaaagcc
aatgccagggtgaaggaggattatgataaccttcagcagctttaccgttcgcagtgggag
caactcctgaagcgggaggtggagggaacagaactgatccagagcatgatcgacatcaag
gttcaagcagcgagagacctgaattatcggaacgagaagccaaagagggtccaggcgaag
aacttggagaaagacctggctgttgtttcccgggttcccatctcgatggacacagatgtc
tttcaaccagtgcagaaagtgccccccgagacagccaagcaccaggagatcaagatcttc
aaaccgtttcggagttctaggtcaagctctttaagcctcccaccccaccccagactcttc
cagtcctttaaagagctattcagaaagcgggcgaatacatctttcatcggcgtggattgt
agtccaacaaacttctgttcggttgcaagaattccagccagagttcgattcagtttgcag
gaagcccacgatggtgaggtcaatgctgtcaagttctctccaaactccaagatcctggcg
actggaggcagtgacaggaaagtgaagctatgggacattgttggaggaatgctccagctg
gtgaaaattctggaggggagtaacgatggagtgaccagcattgagtttgatccctcgggt
ctacatctcttagcaggatcatatgacaacactgcccgcctatggagtctgaaggattgt
gaactgaagcacactttgtcaggtcacagtgcaaaggtcacagcggcaaagttcaagttt
tactgccgagaagctgtcacagggagccacgacagaacaatcaaagtctgggacttgagc
aaagctgcctgtgtcagttcgatccctctcccgtctcgctgcagtgacatcgtttgctca
gattacctcatcataagtggtcactttgatgagaaggttcgcctgtgggacacaaggtcg
ggcacaaaaactgatgagatcccactgcagggaaaggtgacatctttagacattaacgcc
gaacggacccagttactgagctgttcacgcgatgatctgttgaaggtggtggatctgcgg
atgaatgagaccaggcaggagctcagagctgaagggtttaagtgtggagctgactggacc
aaggcaattttcagccccgatgggagctatgctgtggtgggatcatctgatggagttctc
tacatctgggacactctcgctgggaaactggagacttctttggttggacaacacaaatcc
tccatcaatgcagtttcctggtccttatctggagagtatgtggtgagtgtggatcgatca
agattggccagtctctggactgactgctga
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