Hemiscyllium ocellatum (epaulette shark): 132816587
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Entry
132816587 CDS
T09720
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132816587 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132816587 (nup98)
03036 Chromosome and associated proteins [BR:
hoc03036
]
132816587 (nup98)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132816587 (nup98)
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
132816587 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Mpv17_PMP22
Motif
Other DBs
NCBI-GeneID:
132816587
NCBI-ProteinID:
XP_060682361
LinkDB
All DBs
Position
6:complement(123530359..123611625)
Genome browser
AA seq
1832 aa
AA seq
DB search
MFNKSQFGTPTFGNTSGFTTSAFGQNTATPGFGGFGAATAGFGTATNTGGGLFGSTQNKP
GGLFGSSSFGQPATSSTNAGFGFGTSTSNSLFGGTSTGGLFSNQQSNAFTQSKPAGGFGS
FGASTTGGGLFGTTSTASNPFGGTSGTLFGGTTFSTAAPTGTTVKFNPPTGTDTMVKSGV
STNISTKHQCITAMKEYETKSLEELRLEDYTAGRKGPQAPLGGGGGLFGTSTATSSAGTG
LFGATPANPTGGFNFGQNKTGFGANTGLLSQVGVLGTVCGSSLQKTGTGAFGTATGGLFG
QPQQQPSTGLFGSKPFGLATTTQSTGFGFGTTNTLGQPNTSSMSLFGTAPVSQSGGIFGT
NTNTSTGNAFGAGGGLFGNTNAAFTNVNNTLFANKPAGFGTATTSASAFGTAGAGLFGNK
PNLTIGANANTSNFGFGATAATGGLFGNKPATGALGTTLGGGFGSALGAGQTSLFGSTQP
KLGTTLGAGTFGTGAFNAPNAGVGFGTPQAPVCLTDPNASATQQAVLQQQLNALAYTPFG
DSPLFRNPMVDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPATRVRPKALQASGSSKSQ
LFDGLDDDEPTSLSNGTFLPRKSIKKLVLKSMNNSTLCSPVLCKEPNDLASPSDYPENGE
NEQECRLEREDNDQQEVNKCYTNTIVKPIPQTPEGVNSNRHQNSAMDDTITEMNLRNKLR
NGILEGSSEDPCYIDGSLSVERDSEIDDSLPPHPAGIVLTRVGYYTIPSMDELAQQLNEN
GECIVENFTIGRKGYGSIYFPGVVNLTNMNLDEIVHVRRKEVIVYLDDEKKPLVGEGLNR
RAEVTLDGVWPTDKTTRCLIKSPERLMEMGFEERLESSSRKQGARFLEYRSETGSWVFEV
THFSKYGLQDSDEEDSELPSKAETKKMKTAALPDQQAAQVCKPVKNLQLESPLMQQLGRV
TEFDSDMADITQEPMPDSLLDEDISEDQELVSASSNIASSLGINPHSLQVMKASLLSEDE
DVDKMQNQHFAHLTADDHCQRMLPRQILLKQGERSKGLGGGMFYCSFPKKLLPFTVRPEQ
TQQHSPTAVEILRSPPLHPWPVAGQLPSTFSVPSQLPELQLKTVGIRRHQRLVPMEQSVT
NGKGKLLMDMALFAGRSFRVGWAPNCTLCHSGQLLSHVTESETDPCSVEYNFFPKPAKIK
HVSELPFKVHVEKVMLKEERARQDLSLYTEQLEIALRYSHVGTEGSCPFVEPEQGVDALH
EYAAWIQETEDKSEYTEGIVRGWSLAWTLCEALWGNLTELEAAFSEPSPYIQQLERRKAF
SRWLSRTAEERIEEEVAVSRHMSHVDGVFSYLTGKRISEACKLAQQSGDHRLALLLAQAA
GSQQVRELLNLQLADWNQMKADPFIQEERLKIFALLAGKAVWISSEGYINVCSQLDWKRC
LAVHLWYMLPPRSSIAEALNVYSEAFQGSEAVQRYARYPLPPYLEDTNIDLIEAPENEEE
EAPHQDICYHLLKLYSDRHYELHPLLNPRTVTADYLDYRLSWHLWMVLQAMNYTHLSEKH
QTMVHTSFAAQLEAVGLWEWAIFVLLHIPDAQQRGNAVQEQLNRHCSLDETEEQKVKELF
LQEKLGIPPEWIHSAKSLRAHRDGDIHKEALHLIEAGQWNKCHQLVVRYLASDAIINENY
SYLKYFLERLAIPECSLQIQDWETAGAVFYDYICIMETVRGIGEVENPTYELEKIHNEVM
SLCSRIELIECVSAKDRLAQSDMAKQIANMLRTVLGLQHSAESPGDRAPSLQHIPLRLLA
PYIRKLPMPEDYALEELRSLTQSYLRELVVGP
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataagtcgcagtttggcactcccaccttcggcaacaccagtggattcacaact
tcagctttcgggcagaatactgcaactccagggtttggtggatttggtgcggccacagct
ggatttggtacagccaccaatactggtggtggactctttggtagcactcaaaacaagcca
ggaggtctgttcggctccagtagttttggacaaccagcaacttcatccaccaacgctggc
tttggttttggcacgtcgacatccaacagcctgtttgggggcaccagcaccgggggcctg
ttctccaatcagcagagcaatgccttcactcagagcaaacctgctggcggctttggaagt
tttggagccagcacgacgggaggtggcctgtttgggaccaccagcactgcctctaatcct
ttcggtgggacctctggaaccttgtttgggggaaccacctttagcactgctgctccgact
ggaaccacggttaaattcaatcctccaacaggcacagatacaatggtgaagtctggagtc
agcaccaacattagcaccaaacaccagtgtatcacagccatgaaggaatacgaaaccaag
tcactggaggagctgcgtttggaggattacacagctggccgcaaagggcctcaggcaccc
ctagggggtggtggtggtctgtttggcacctcgacggctacatccagtgccggcactggg
ctgtttggagccactccagccaacccaaccggaggcttcaactttggacagaataaaact
ggcttcggagcaaacactggtctcctttcccaagtgggtgtgctggggacagtctgtggg
tccagtcttcaaaaaacaggtactggtgcttttggcacagccactgggggcctgtttggt
cagccgcagcagcagcctagcacaggcctgtttgggagcaaaccctttggactggccacc
accacacagagcaccggcttcggtttcggcacaaccaacaccctgggtcagcccaacacc
agcagcatgagtttattcggaactgccccggtctctcagtcaggagggatttttggaacc
aacaccaacaccagcaccgggaatgcatttggcgcagggggtggtctctttggcaatacc
aatgctgctttcaccaacgtcaacaataccctgtttgctaacaaacctgctggatttgga
actgctacaacgagtgcttctgccttcggcacagctggtgctggcctgttcggtaacaaa
ccgaacctgactattggagccaacgccaatacttccaactttgggtttggcgcaactgca
gcaaccggtggtctgtttgggaataaacctgcaactggagcccttggaacaacgctagga
ggtggatttggatcagctctgggtgctgggcagacctccctgtttggaagcactcagccc
aagttgggcaccactcttggagccggaacgtttggaacaggagccttcaatgcacccaat
gccggagtgggatttggaacacctcaggcccctgtctgcctgactgacccgaatgcctcc
gccacacagcaggctgttttacagcagcagctcaatgctctggcctacacccctttcgga
gattctccactcttcagaaatcccatggttgatccaaagaagaaagaggagcgattgaag
cccacaaacccagcagcccagaaggcactgactacccccacccactacaagctgactccc
cgccctgccaccagagtacggccaaaagccctgcaggcctctggctcctccaagtcccag
ctctttgatggactggatgatgatgaacctacatctctatcgaatggcaccttcctgccc
aggaagagcatcaagaagctggtactgaagagcatgaataactctactctgtgctcgcct
gtactctgcaaggaaccaaacgatttggcctcaccatcagactatccagagaatggagag
aatgaacaagaatgtcggttggagagagaggataatgaccagcaggaggtgaataaatgc
tacaccaacaccatagtcaaaccgatcccacagacacccgagggagtaaacagcaacaga
caccagaactccgctatggacgataccatcactgagatgaacttgaggaacaagctgcga
aatggtatattggaaggcagcagtgaagatccatgctacatcgatgggtccctgagtgtg
gagagggattctgagatagatgacagtttaccacctcatcccgcaggcatagtgctgact
cgagtcggttactataccatcccctccatggatgaactggcccaacaactgaacgagaat
ggagaatgtatcgtggagaacttcaccattggccgcaaaggttacgggtctatatatttc
cctggcgttgtgaacttaaccaacatgaacttggatgagattgtgcatgtccgcaggaaa
gaggtgatcgtttatctcgacgatgagaaaaagcccctggtgggtgagggcctgaacaga
cgagctgaggtaacgttggatggagtctggccaactgacaagaccactcgctgcctgatc
aagtcccctgagcgcctgatggagatgggttttgaggagagactggagagctcatcgcgg
aagcagggcgctcgcttcctggagtacaggtcggagactggctcctgggtcttcgaggta
acacatttctccaagtatgggcttcaggattcggatgaggaggatagtgaactgccttca
aaagctgagaccaagaagatgaaaacagcagctcttcctgatcagcaggcagcacaagtc
tgcaagcctgtcaagaacctgcagctggagagccccctgatgcagcagctggggcgtgtg
accgagtttgacagcgatatggctgacatcacccaggagcccatgccggacagtttactg
gatgaggacatcagtgaggaccaggagcttgtgtcagcttccagcaacattgcatccagc
ttgggcatcaacccccactctcttcaggtaatgaaggcctcgctgttgagtgaagatgag
gatgtagataaaatgcaaaatcagcactttgcacatttgacagctgatgaccattgccag
cggatgttaccacggcagatcttgctaaagcaaggggaaaggtcgaaaggtctgggtgga
ggcatgttttattgctcctttccaaagaagctcctgcctttcactgtccgcccggagcag
acacagcagcactctccgaccgcggtggagattcttcgctcaccgccccttcacccctgg
ccagtggcaggccagctgccctccacattcagtgtgcccagccagctgccggagttgcag
ctgaagacagtgggaattagacgccaccagaggctggtgccaatggagcagtcggttacc
aacggcaaagggaagcttctgatggacatggccctgtttgcagggcgctcgttccgggtg
ggctgggcacccaactgcaccctctgtcacagtggccaactactgagccatgtaaccgaa
tccgagactgacccatgcagtgtggagtataacttctttccaaagccagcaaagatcaaa
catgtttcagagctgcctttcaaggtgcatgtggagaaggtgatgttgaaggaagagcga
gcgagacaggatttgtcgttgtacaccgagcagctggagattgctctgcgctacagccat
gtgggcacggagggcagctgcccgtttgttgaacccgagcagggggtagatgctctgcac
gagtacgcagcttggatccaggagactgaagacaagagtgaatacacagaaggtatagtg
agaggctggtcgttagcatggacactgtgtgaggctctctggggtaacctgacggagctg
gaagctgccttttctgagccgagtccatacatccagcagctggagcgcaggaaagcgttc
tcccgttggctctctcggactgcagaggagaggatcgaggaggaggtggctgtgtcgcgt
cacatgagtcacgtggatggtgtcttcagctatctaactgggaagagaatcagtgaggcg
tgcaaacttgcacagcagtcaggggatcacaggctagccctgctgctggctcaggctgct
ggtagccagcaggtcagagagctgctcaacctgcaacttgctgactggaaccagatgaag
gcggatcccttcatccaggaggagaggctgaagatctttgctcttctggctgggaaagca
gtgtggatatcttcagagggttacataaacgtctgctcgcagttggattggaaacgctgt
ctggctgtccacctttggtatatgctgcctcccagatcctccattgctgaggctctgaat
gtgtacagtgaagcctttcagggcagtgaggccgtccagaggtatgcacggtatcccctg
cctccctacctggaagatacaaacattgacctgatagaagctcctgagaacgaagaggag
gaagccccccaccaggacatctgttaccatttactgaagttgtacagtgacagacactac
gagctgcacccactgctcaatcccaggactgtgacagctgactacttggattacagattg
agctggcacctatggatggtgctgcaggcaatgaactacactcacctctcggagaaacat
cagaccatggtccacaccagcttcgctgctcagctcgaggcagtcggcctctgggaatgg
gctatctttgtactcctgcacattcccgatgctcagcagcgagggaatgcagtgcaggag
cagctaaaccgccattgctctttggatgagacagaagagcagaaggtgaaagagttgttt
ctgcaggagaagctggggatccccccggagtggatccacagtgccaaaagcctgagggct
caccgagacggtgacatccacaaggaggcgctgcacctgatcgaagctggccaatggaac
aagtgtcaccagctggtggtccggtacctcgcttcagatgccattattaatgaaaactac
agctacctgaaatatttcctggagaggctggccataccagagtgcagcttacagatccag
gactgggagactgccggagctgtcttctacgactacatctgcatcatggaaacggtgcga
ggaattggcgaggtggagaatccaacttacgagctggagaaaattcacaacgaggtgatg
tccctgtgcagccggatagaactgatcgaatgtgtctcagccaaagatcgactggctcag
tctgacatggctaaacagatagccaacatgctgcgcactgtgcttgggctccagcacagt
gcagagtcacctggggacagagccccgagtctccaacacattcccctccgcctgctcgct
ccttacatccgcaagctgcctatgcctgaagactatgccctggaggaattgcgcagcctg
actcagagctacctgcgggagctggttgtcggcccttaa
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integrated database retrieval system
