Hemiscyllium ocellatum (epaulette shark): 132816591
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Entry
132816591 CDS
T09720
Name
(RefSeq) synaptopodin-2-like isoform X1
KO
K24066
synaptopodin-2
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132816591
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hoc04990
]
132816591
Domain-containing proteins not elsewhere classified [BR:
hoc04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
132816591
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
Calsarcin
Pept_S41_N_bact
DUF7037
Motif
Other DBs
NCBI-GeneID:
132816591
NCBI-ProteinID:
XP_060682377
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Position
1:complement(138664727..138809528)
Genome browser
AA seq
1286 aa
AA seq
DB search
MGIGDYICVTISGGAPWGFRLQGGKEHKLPLQISKVRKKSKACRAGLCEGDEMISINGKP
CSELTHSEAMQLIDGTSENLQILIKRPISEKADQPEYEDYEGTKRQETVESRMQVSDSKT
SCKHGLPFELYISESQDEAYYGETESDTDVTGKKEGNQRQNVSSLLLKECTPSGESRQDP
KWKEKRGAQHTAMVELQLSLTQGKLGDPETTAVTVIGAEKIPSAAREPTTLYESIQKTES
AASETNGNVTTQTASATISHQNRSDKKVKLVESELQGTEADSYQSRVELSLDSSDREHSG
REASTSEVGSACADSLAEDGQSKTRSNPPFLVGISSEGTEPGSEGTRSGKDSTRTHKHRA
RQAKIRRSESLSEKQVKEAKSKCKSIALLLTATPTPSSKGALMFKKRRQRAKKYTLVSYG
TGEFDPDDDQEDSIEFALVPTSDSDLDEDFCADVNSAQVVTFDWDTGLVEVEKKEKTEDE
MQRLPESKGKGALLFAKRKQRIDQFTAEQEEMRRTGANEAASTHTVETENLYQTTKSSLY
DSSNTIQNHATENYIDVSKLHGTENVRGGKARSEMVIQNSKSAETNRAGAMNRTAIPFPG
VQNRAAAPFSPTRNVANSLSNVPPPPPYSSISPPPDNIHRIASPPLASVAQPAKWSPMGI
AGEQIASRDERICVPAIKTGILQDARKRNTTKPMFTFVDRPKVAPNPELLSMVKGKTDRR
RGVDQPGGGFESGPEEDYLSLGAEASNFLQTPAVKQKKPPPVAPKPFVKSPPTGPNPTLP
PLSPPGVTSAQAPVHSSKSAKQMSVKLHSVQPVNTWYQSQGSANQFVSSTGPQSVTSTHS
YPSKMPPTTPIANSAPAGGMGPAYEMPALKGKGAQLFARRQSRMEKYVVDSSTVKARQAR
SSSPTPSMPASWKYSSNIRAPPPLAYNPIHSPSYPPGILKAHAQSASSSKPNKGAKVKGT
KKPLNALDVMKHQPYQLNSSLFTFSSTPDAKTPLSTSSSLSKQSIKSDPVPLQPVNATYP
ISKSVSSVSTGPSFNQANTASADEEHIYSSGKNVFVPPSYASYPKQESSALSVAMAPRPK
FSAKKVGVTAQAQSKGFQPVQVPEKQSQYNYSHGLSGAQAMKQPGTPLSGRPASQSEKIA
KKKLTPWDAASQSAVGSVEEAFSRRNIQESIAKNIVSAARRKTLPEPPEEWKARVAYVPP
LPSGYSSIAAFQVRRPSSISSSVKTTASIPTSISQQSSMYKQPLNYQQSLTDSDLSTGTC
SEHETSGKQVADPNYNPYPRGWKKQR
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgggcattggggattacatctgtgtcacaatcagtggtggagcaccctggggattcaga
ctgcaaggtggcaaggagcacaagctgccattacagatttcaaaggtccggaagaagagt
aaggcctgcagagctggattatgtgagggagatgaaatgatctcaatcaacggtaaacct
tgttcagaattaacccattcagaagccatgcaactgattgatgggacaagtgaaaatcta
caaatcctgattaaaaggcctatcagtgagaaagctgatcagccagaatatgaagattat
gaaggaacaaagagacaagaaacagttgaaagcaggatgcaagttagtgacagtaaaaca
tcttgcaagcatggccttccttttgaactttacatctctgagtcccaggatgaggcttac
tatggggagactgagagtgatacagatgttacgggcaagaaagaaggaaaccagagacag
aatgtctctagcttgcttttgaaagaatgtaccccttctggagaatcccggcaggaccct
aaatggaaggagaagagaggtgcccaacatacggccatggtggagctccagttgtccctg
actcaaggaaagcttggtgatccagagacaactgctgttaccgtcattggggccgaaaaa
atcccttctgcagccagagagccaaccacactgtatgagagtatccagaaaactgaatca
gcagcatcagaaactaatggaaatgttacaacccagactgcctcggctactatatcacac
cagaacaggagtgacaaaaaggtcaagctggtcgaaagtgagctgcaaggaacagaagcg
gattcatatcagtctcgggtggagctgtctttggattcctcggacagagagcacagtgga
agggaggcctccacgtctgaagtaggtagtgcatgtgctgactcgttggctgaagacgga
cagtcaaaaacacgtagcaaccctcctttcttggttgggatttcatcagagggaacagag
cccggatcagaagggacacgctctgggaaggattctacaagaacacacaaacaccgagct
aggcaagccaaaattcgacggagtgaaagtctgtcagaaaaacaggttaaagaagccaag
tcaaagtgtaaaagcattgccttgctcctgacagcaactcctacccccagctccaagggg
gcgttaatgtttaagaagcgtcgccagagggcaaaaaagtatactttagtcagctacggc
actggggagtttgatcctgacgacgatcaagaagactccatagaattcgctctggtacca
accagcgactcagatcttgacgaggacttttgtgctgatgtcaactcagctcaggttgtg
acgtttgactgggacacaggtttagtggaagttgaaaagaaagagaagacagaggacgaa
atgcagagattaccagagagcaagggcaaaggtgcgttgttgtttgccaagaggaagcaa
aggattgatcaattcacagctgagcaagaggaaatgaggagaacaggagcgaatgaagct
gcctccactcacactgtagagactgaaaatctttaccaaacaacaaaaagcagtttatat
gattcatcaaacacaatacaaaatcacgccactgaaaattatattgatgtaagtaagttg
catggaactgaaaatgtacgaggagggaaagcgagatctgaaatggtgatccagaactca
aagtctgctgaaaccaatagagcaggtgcaatgaacagaacagcgataccatttcctggt
gtgcaaaatcgagctgcagctcccttctctcctacaagaaatgtggcgaattccttgtca
aatgtgcctccccccccaccctattcttccattagtccaccacctgacaatatccatcgc
attgcatctcctcctttggcatccgtggctcaaccagccaaatggtcacctatgggaatt
gcaggagagcagatagcctccagagatgagagaatctgtgtaccagcaataaaaactggc
attttacaagatgcaagaaaacggaacactacaaaacccatgtttacatttgttgaccgt
cctaaggtagctccaaatccagaactcctgtcaatggtcaaaggtaagacagaccgacgt
agaggagtagatcagcctggtggaggttttgagtcaggacctgaagaagattatcttagt
ttaggtgcagaagcatcaaattttttacagacaccagcagtaaagcagaagaaaccacct
ccagttgcaccaaagccatttgttaagagccctcctactgggccaaacccaacattacct
ccgttatcacctccaggagtcacaagtgctcaagctccagtccattcttctaagagcgct
aagcagatgtctgtaaaattgcattcagttcaacctgttaatacatggtaccagtcccaa
ggttctgccaaccagtttgtatcttcaactggaccccaatcagtaacatcaacacattca
tatccttcaaaaatgccacccacaactcccatagcaaattctgcacctgctggaggtatg
ggtccagcctatgagatgccagctttgaaaggtaaaggagcacagttatttgcaaggaga
caatctcgcatggagaaatacgtagtagattcatcaacagtcaaagccagacaagcacgg
tcatcatcccccaccccttccatgccagcatcttggaagtattcatctaatataagagca
cctccccctttggcttacaatcctattcattctccatcttatcctcctggcattttgaaa
gcacacgcacaatctgcatcttcatctaagccaaataaaggtgccaaagttaaaggcact
aaaaaacctctcaatgctttggatgtcatgaagcatcaaccatatcagcttaattcatct
ttgttcactttttcatccactcctgatgctaagacacctctgtccacaagctcatcactt
tctaagcagtctataaagtctgatcctgtcccacttcaaccagttaatgctacatatcct
atttctaagagtgtctcatctgtgtcaacaggaccatctttcaatcaagctaatacagct
tctgctgatgaggagcatatctattcttctggaaagaatgtctttgtacccccaagttat
gcatcatatccaaagcaagaatcaagtgctttgtcggttgccatggcaccaagaccaaag
ttttcagcaaagaaagtgggcgttacagcacaggcgcagtcaaaaggtttccaacctgta
caagtaccagaaaaacaatcacaatacaactattctcatgggctttctggagcacaagca
atgaaacagccaggaaccccgttatctggaagaccagcatcccagtcagagaaaattgca
aagaaaaaactgaccccatgggatgctgcatcacagtctgctgttggttcagtagaggaa
gcattttccagaaggaatatccaggagtcaatagcaaagaatattgtgtcagcagcccgc
cgaaagacattacctgagcctccagaggaatggaaggcacgagtagcctatgtaccacca
cttccaagtggttattcatctattgctgctttccaggtcagaagaccatcgagcatatca
tcctcagtcaaaactacagcatcaattccaacatctattagccaacagagttcaatgtat
aaacagccactaaattatcagcaatcactgactgattcagatctatctactgggacatgc
tctgaacatgaaacttcaggaaagcaggtagctgatccaaattataacccttatccacgg
ggctggaagaaacaaagatga
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